RNA–Protein interactions for RNA: ENST00000560982.5

USP8-215, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 3

Gene USP8, Length 410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-215ENST00000560982 ARHGAP17Q68EM7 881 aa14.67□□□□□ -0.06
USP8-215ENST00000560982 FMR1NBQ8N0W7 255 aaPredicted RBP14.67□□□□□ -0.06
USP8-215ENST00000560982 ARHGAP18Q8N392 663 aa14.67□□□□□ -0.06
USP8-215ENST00000560982 IPO4Q8TEX9 1081 aaKnown RBP14.67□□□□□ -0.06
USP8-215ENST00000560982 ERLEC1Q96DZ1 483 aa14.67□□□□□ -0.06
USP8-215ENST00000560982 TSG101Q99816 390 aa14.67□□□□□ -0.06
USP8-215ENST00000560982 NUSAP1Q9BXS6 441 aaKnown RBP14.67□□□□□ -0.06
USP8-215ENST00000560982 UBXN6Q9BZV1 441 aa14.67□□□□□ -0.06
USP8-215ENST00000560982 FAM124BQ9H5Z6 455 aaPredicted RBP14.67□□□□□ -0.06
USP8-215ENST00000560982 ZNF510Q9Y2H8 683 aa14.67□□□□□ -0.06
USP8-215ENST00000560982 GIPC1O14908 333 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 SLC16A3O15427 465 aaKnown RBP14.66□□□□□ -0.06
USP8-215ENST00000560982 NDUFV2P19404 249 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 ITPKAP23677 461 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 CORO1AP31146 461 aaKnown RBP14.66□□□□□ -0.06
USP8-215ENST00000560982 CHKAP35790 457 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 YWHAGP61981 247 aaKnown RBP eCLIP14.66□□□□□ -0.06
USP8-215ENST00000560982 SHC2P98077 582 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 UAP1L1Q3KQV9 507 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 RAB41Q5JT25 222 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 SH3PXD2AQ5TCZ1 1133 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 ZNF658Q5TYW1 1059 aaPredicted RBP14.66□□□□□ -0.06
USP8-215ENST00000560982 KIAA1211LQ6NV74 962 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 SLC36A4Q6YBV0 504 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 RSRC2Q7L4I2 434 aaKnown RBP14.66□□□□□ -0.06
USP8-215ENST00000560982 PIGZQ86VD9 579 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 DEFB119Q8N690 84 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 ANKRD52Q8NB46 1076 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 P2RY11Q96G91 374 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 GSDMAQ96QA5 445 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 GABRG3Q99928 467 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 DCLK3Q9C098 648 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 CD248Q9HCU0 757 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 CACNA2D2Q9NY47 1150 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 FBXO10Q9UK96 956 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 PILRBQ9UKJ0 227 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 STRIP2Q9ULQ0 834 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 RAD54BQ9Y620 910 aa14.66□□□□□ -0.06
USP8-215ENST00000560982 MAP1BP46821 2468 aaKnown RBP14.66□□□□□ -0.06
USP8-215ENST00000560982 IGHV1OR15-9A0A0B4J2B8 117 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 GOLGA6L4A6NEF3 574 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 GFRA2O00451 464 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 ZNF217O75362 1048 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 KRT37O76014 449 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 PENKP01210 267 aaPredicted RBP14.65□□□□□ -0.06
USP8-215ENST00000560982 ENGP17813 658 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 HOXD12P35452 270 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 MAPK8P45983 427 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 TKTL1P51854 596 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 FKBP3Q00688 224 aaKnown RBP14.65□□□□□ -0.06
USP8-215ENST00000560982 CUL2Q13617 745 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 GOLGA7BQ2TAP0 167 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 COBLL1Q53SF7 1204 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 FYB2Q5VWT5 728 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 PEAR1Q5VY43 1037 aaPredicted RBP14.65□□□□□ -0.06
USP8-215ENST00000560982 ANKRD40Q6AI12 368 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 SLC23A3Q6PIS1 610 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 ZC3H3Q8IXZ2 948 aaKnown RBP14.65□□□□□ -0.06
USP8-215ENST00000560982 MARCH2Q9P0N8 246 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 AGO1Q9UL18 857 aaKnown RBP14.65□□□□□ -0.06
USP8-215ENST00000560982 CYP8B1Q9UNU6 501 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 SLC27A6Q9Y2P4 619 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 COQ4Q9Y3A0 265 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 CACNA1BQ00975 2339 aa14.65□□□□□ -0.06
USP8-215ENST00000560982 SLC12A8A0AV02 714 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 WASH3PC4AMC7 463 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 TULP2O00295 520 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 SMC2O95347 1197 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 ZBED1O96006 694 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 CFIP05156 583 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 CSRP1P21291 193 aaKnown RBP14.64□□□□□ -0.07
USP8-215ENST00000560982 PMS1P54277 932 aaKnown RBP14.64□□□□□ -0.07
USP8-215ENST00000560982 BCAT1P54687 386 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 YWHAEP62258 255 aaKnown RBP14.64□□□□□ -0.07
USP8-215ENST00000560982 ZNF33AQ06730 810 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 PDE4CQ08493 712 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 ZNF252P-AS1Q0IIN9 211 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 SGO2Q562F6 1265 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 DENND1CQ8IV53 801 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 ERCC4Q92889 916 aaPredicted RBP14.64□□□□□ -0.07
USP8-215ENST00000560982 SMARCE1Q969G3 411 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 ULBP1Q9BZM6 244 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 SLC6A17Q9H1V8 727 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 HESX1Q9UBX0 185 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 ARMCX3Q9UH62 379 aaPredicted RBP14.64□□□□□ -0.07
USP8-215ENST00000560982 TSPAN16Q9UKR8 245 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 STON1Q9Y6Q2 735 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 CEP295Q9C0D2 2601 aa14.64□□□□□ -0.07
USP8-215ENST00000560982 ADAMTS9Q9P2N4 1935 aa14.63□□□□□ -0.07
USP8-215ENST00000560982 TRIM49BA6NDI0 452 aa14.63□□□□□ -0.07
USP8-215ENST00000560982 XPO1O14980 1071 aaKnown RBP14.63□□□□□ -0.07
USP8-215ENST00000560982 CYBBP04839 570 aa14.63□□□□□ -0.07
USP8-215ENST00000560982 CEACAM1P13688 526 aa14.63□□□□□ -0.07
USP8-215ENST00000560982 CD19P15391 556 aa14.63□□□□□ -0.07
USP8-215ENST00000560982 MFAP3P55082 362 aa14.63□□□□□ -0.07
USP8-215ENST00000560982 LRRC63Q05C16 580 aa14.63□□□□□ -0.07
USP8-215ENST00000560982 BST2Q10589 180 aaKnown RBP14.63□□□□□ -0.07
USP8-215ENST00000560982 GEN1Q17RS7 908 aa14.63□□□□□ -0.07
USP8-215ENST00000560982 DUOXA1Q1HG43 343 aa14.63□□□□□ -0.07
USP8-215ENST00000560982 PM20D1Q6GTS8 502 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms