RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 PRKCHP24723 683 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 TKTP29401 623 aaKnown RBP15.13■□□□□ 0.01
CRTC3-210ENST00000560927 MAGEA3P43357 314 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 BCAT1P54687 386 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 SOX4Q06945 474 aaPredicted RBP15.13■□□□□ 0.01
CRTC3-210ENST00000560927 CTC1Q2NKJ3 1217 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 PRAMEF19Q5SWL8 479 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 CLNKQ7Z7G1 428 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 CHSY1Q86X52 802 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 VPS52Q8N1B4 723 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 NPLOC4Q8TAT6 608 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 LENG1Q96BZ8 264 aaPredicted RBP15.13■□□□□ 0.01
CRTC3-210ENST00000560927 SIGLEC10Q96LC7 697 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 FRMD8Q9BZ67 464 aaPredicted RBP15.13■□□□□ 0.01
CRTC3-210ENST00000560927 DTLQ9NZJ0 730 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 MAD1L1Q9Y6D9 718 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 RALGAPA2Q2PPJ7 1873 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 C2orf71A6NGG8 1288 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 KPNA7A9QM74 516 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 DYNC1LI2O43237 492 aaPredicted RBP15.12■□□□□ 0.01
CRTC3-210ENST00000560927 GCATO75600 419 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 ATP5HO75947 161 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 APOEP02649 317 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 GOT1P17174 413 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 DESP17661 470 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 GRB14Q14449 540 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 PRKD1Q15139 912 aaPredicted RBP15.12■□□□□ 0.01
CRTC3-210ENST00000560927 NCBP2-AS2Q69YL0 99 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 FAM131BQ86XD5 332 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 CRYBG2Q8N1P7 616 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 MECRQ9BV79 373 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 ABHD16BQ9H3Z7 469 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 EBF2Q9HAK2 575 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 KCNK13Q9HB14 408 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 TMPRSS4Q9NRS4 437 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 RRN3P2A6NIE6 340 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 COPEO14579 308 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 RFPL1O75677 317 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 SNRPAP09012 282 aaKnown RBP15.12■□□□□ 0.01
CRTC3-210ENST00000560927 CYP2C9P11712 490 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 MAP2K2P36507 400 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 SERPINB4P48594 390 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 SNX16P57768 344 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 PITX1P78337 314 aaPredicted RBP15.12■□□□□ 0.01
CRTC3-210ENST00000560927 MRPS5P82675 430 aaKnown RBP15.12■□□□□ 0.01
CRTC3-210ENST00000560927 DPY19L2Q6NUT2 758 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 MCUQ8NE86 351 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 ZNF398Q8TD17 642 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 DNAJB3Q8WWF6 145 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 PRR11Q96HE9 360 aaPredicted RBP15.12■□□□□ 0.01
CRTC3-210ENST00000560927 QKIQ96PU8 341 aaKnown RBP eCLIP15.12■□□□□ 0.012e-6■■■■□ 26.5
CRTC3-210ENST00000560927 RAB3IPQ96QF0 476 aaPredicted RBP15.12■□□□□ 0.01
CRTC3-210ENST00000560927 TBC1D10AQ9BXI6 508 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 MORF4L1Q9UBU8 362 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 UBQLN1Q9UMX0 589 aaKnown RBP15.12■□□□□ 0.01
CRTC3-210ENST00000560927 PIN4Q9Y237 131 aaKnown RBP15.12■□□□□ 0.01
CRTC3-210ENST00000560927 USP3Q9Y6I4 520 aa15.12■□□□□ 0.01
CRTC3-210ENST00000560927 HMX2A2RU54 273 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 ZNF487B1APH4 448 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 ANP32DO95626 131 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 NEFHP12036 1026 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 VAV1P15498 845 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 EPHB2P29323 1055 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 RPL34P49207 117 aaKnown RBP15.11■□□□□ 0.01
CRTC3-210ENST00000560927 PARP6Q2NL67 630 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 DENND5BQ6ZUT9 1274 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 INPP5DQ92835 1189 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 TRIM55Q9BYV6 548 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 SLC13A1Q9BZW2 595 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 SLC5A4Q9NY91 659 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 HEY2Q9UBP5 337 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 ZNF180Q9UJW8 692 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 CENPFP49454 3210 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 TRDMT1O14717 391 aaKnown RBP15.11■□□□□ 0.01
CRTC3-210ENST00000560927 KRT37O76014 449 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 CCND1P24385 295 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 APBB1IPQ7Z5R6 666 aaPredicted RBP15.11■□□□□ 0.01
CRTC3-210ENST00000560927 UNC5BQ8IZJ1 945 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 LGMNQ99538 433 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 EBNA1BP2Q99848 306 aaKnown RBP15.11■□□□□ 0.01
CRTC3-210ENST00000560927 SNX25Q9H3E2 840 aa15.11■□□□□ 0.01
CRTC3-210ENST00000560927 FBXO6Q9NRD1 293 aaPredicted RBP15.11■□□□□ 0.01
CRTC3-210ENST00000560927 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.11■□□□□ 0.01
CRTC3-210ENST00000560927 NRCAMQ92823 1304 aa15.1■□□□□ 0.01
CRTC3-210ENST00000560927 DLDP09622 509 aaKnown RBP15.1■□□□□ 0.01
CRTC3-210ENST00000560927 IGFBP6P24592 240 aaPredicted RBP15.1■□□□□ 0.01
CRTC3-210ENST00000560927 NR2C2P49116 596 aa15.1■□□□□ 0.01
CRTC3-210ENST00000560927 CES4AQ5XG92 561 aa15.1■□□□□ 0.01
CRTC3-210ENST00000560927 HEATR6Q6AI08 1181 aaKnown RBP15.1■□□□□ 0.01
CRTC3-210ENST00000560927 IQSEC1Q6DN90 963 aa15.1■□□□□ 0.01
CRTC3-210ENST00000560927 FAM13CQ8NE31 585 aa15.1■□□□□ 0.01
CRTC3-210ENST00000560927 NCAPGQ9BPX3 1015 aa15.1■□□□□ 0.01
CRTC3-210ENST00000560927 TMEM120AQ9BXJ8 343 aa15.1■□□□□ 0.01
CRTC3-210ENST00000560927 IQCGQ9H095 443 aaKnown RBP15.1■□□□□ 0.01
CRTC3-210ENST00000560927 PIH1D1Q9NWS0 290 aaKnown RBP15.1■□□□□ 0.01
CRTC3-210ENST00000560927 GTF2IRD1Q9UHL9 959 aa15.1■□□□□ 0.01
CRTC3-210ENST00000560927 SYNJ2BP-COX16A0A087WUM0 186 aa15.1■□□□□ 0.01
CRTC3-210ENST00000560927 CLDN5O00501 218 aa15.1■□□□□ 0.01
CRTC3-210ENST00000560927 CYB561D2O14569 222 aa15.1■□□□□ 0.01
CRTC3-210ENST00000560927 BEST1O76090 585 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms