RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 C2CD6Q53TS8 623 aa16.58■□□□□ 0.24
PBX1-219ENST00000560641 TATDN1Q6P1N9 297 aa16.58■□□□□ 0.24
PBX1-219ENST00000560641 C16orf89Q6UX73 402 aa16.58■□□□□ 0.24
PBX1-219ENST00000560641 SNRNP27Q8WVK2 155 aaKnown RBP16.58■□□□□ 0.24
PBX1-219ENST00000560641 ZNF516Q92618 1163 aa16.58■□□□□ 0.24
PBX1-219ENST00000560641 BORCS5Q969J3 196 aa16.58■□□□□ 0.24
PBX1-219ENST00000560641 CCDC127Q96BQ5 260 aa16.58■□□□□ 0.24
PBX1-219ENST00000560641 MARCOQ9UEW3 520 aaPredicted RBP16.58■□□□□ 0.24
PBX1-219ENST00000560641 FER1L6Q2WGJ9 1857 aa16.58■□□□□ 0.24
PBX1-219ENST00000560641 RBM47A0AV96 593 aaKnown RBP16.57■□□□□ 0.24
PBX1-219ENST00000560641 BOLA2-SMG1P6H3BVE0 249 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 BAIAP3O94812 1187 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 TBXAS1P24557 533 aaPredicted RBP16.57■□□□□ 0.24
PBX1-219ENST00000560641 ADSLP30566 484 aaPredicted RBP16.57■□□□□ 0.24
PBX1-219ENST00000560641 PSMD6Q15008 389 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 TGFBIQ15582 683 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 INSCQ1MX18 579 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 ZNF829Q3KNS6 432 aaPredicted RBP16.57■□□□□ 0.24
PBX1-219ENST00000560641 POMGNT1Q8WZA1 660 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 ABHD8Q96I13 439 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 PFDN4Q9NQP4 134 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 TMOD2Q9NZR1 351 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 PTBP2Q9UKA9 531 aaKnown RBP16.57■□□□□ 0.24
PBX1-219ENST00000560641 APPL1Q9UKG1 709 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 RNF11Q9Y3C5 154 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 RFTN1Q14699 578 aaPredicted RBP16.57■□□□□ 0.24
PBX1-219ENST00000560641 WDR44Q5JSH3 913 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 TCHHL1Q5QJ38 904 aaPredicted RBP16.57■□□□□ 0.24
PBX1-219ENST00000560641 CCDC80Q76M96 950 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 SEPT12Q8IYM1 358 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 POU5F2Q8N7G0 328 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 DUS3LQ96G46 650 aaKnown RBP16.57■□□□□ 0.24
PBX1-219ENST00000560641 OSBPL11Q9BXB4 747 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 EMCNQ9ULC0 261 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 CXorf49A8MYA2 514 aaPredicted RBP16.57■□□□□ 0.24
PBX1-219ENST00000560641 APOEP02649 317 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 PICALMQ13492 652 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 FASTKD1Q53R41 847 aaKnown RBP16.57■□□□□ 0.24
PBX1-219ENST00000560641 BRDTQ58F21 947 aaPredicted RBP16.57■□□□□ 0.24
PBX1-219ENST00000560641 LPCAT2Q7L5N7 544 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 TMEM110Q86TL2 294 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 LILRA2Q8N149 483 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 SAMD3Q8N6K7 520 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 MCUQ8NE86 351 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 NUF2Q9BZD4 464 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 MAF1Q9H063 256 aa16.57■□□□□ 0.24
PBX1-219ENST00000560641 TRIM43BA6NCK2 446 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 ARP10275 920 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 PSMC3P17980 439 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 KDELR1P24390 212 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 PSMD8P48556 350 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 YWHAGP61981 247 aaKnown RBP eCLIP16.56■□□□□ 0.24
PBX1-219ENST00000560641 GK3PQ14409 553 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 GRAMD4Q6IC98 578 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 GPR180Q86V85 440 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 ZNF420Q8TAQ5 688 aaPredicted RBP16.56■□□□□ 0.24
PBX1-219ENST00000560641 NLRP7Q8WX94 980 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 SLC7A3Q8WY07 619 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 SMYD2Q9NRG4 433 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 WDR81Q562E7 1941 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 SLC16A4O15374 487 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 CST8O60676 142 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 BCAS2O75934 225 aaPredicted RBP16.56■□□□□ 0.24
PBX1-219ENST00000560641 GLDCP23378 1020 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 NLRP11P59045 1033 aaKnown RBP16.56■□□□□ 0.24
PBX1-219ENST00000560641 HERC3Q15034 1050 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 AMIGO2Q86SJ2 522 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 C4orf19Q8IY42 314 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 PI4K2AQ9BTU6 479 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 APOL6Q9BWW8 343 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 TBC1D23Q9NUY8 699 aa16.56■□□□□ 0.24
PBX1-219ENST00000560641 CCDC195A0A1B0GUA6 201 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 DHX15O43143 795 aaKnown RBP16.55■□□□□ 0.24
PBX1-219ENST00000560641 GLRA3O75311 464 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 ENDOD1O94919 500 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 HALP42357 657 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 KCTD21Q4G0X4 260 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 EPGNQ6UW88 154 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 TMEM179Q6ZVK1 233 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 TERB1Q8NA31 727 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 CMASQ8NFW8 434 aaPredicted RBP16.55■□□□□ 0.24
PBX1-219ENST00000560641 GIPC3Q8TF64 312 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 CHPT1Q8WUD6 406 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 USP6NLQ92738 828 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 CCDC124Q96CT7 223 aaKnown RBP16.55■□□□□ 0.24
PBX1-219ENST00000560641 MXRA8Q9BRK3 442 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 TRPV5Q9NQA5 729 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.55■□□□□ 0.24
PBX1-219ENST00000560641 PNPLA3Q9NST1 481 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 SMCHD1A6NHR9 2005 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 FUOMA2VDF0 154 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 DKC1O60832 514 aaKnown RBP eCLIP16.55■□□□□ 0.24
PBX1-219ENST00000560641 HMOX2P30519 316 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 HK2P52789 917 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 KLF10Q13118 480 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 DNAJC24Q6P3W2 148 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 C4orf22Q6V702 233 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 NDUFAF2Q8N183 169 aa16.55■□□□□ 0.24
PBX1-219ENST00000560641 CPSF7Q8N684 471 aaKnown RBP16.55■□□□□ 0.24
PBX1-219ENST00000560641 PPM1NQ8N819 430 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms