RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ANKS6Q68DC2 871 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 TRMT11Q7Z4G4 463 aaKnown RBP13.85□□□□□ -0.19
TRAF3-208ENST00000560371 IARS2Q9NSE4 1012 aaKnown RBP13.85□□□□□ -0.19
TRAF3-208ENST00000560371 GNG14A0A1W2PPG7 69 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 PMS1P54277 932 aaKnown RBP13.85□□□□□ -0.19
TRAF3-208ENST00000560371 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 C10orf53Q8N6V4 93 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 CCT8L2Q96SF2 557 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 FICDQ9BVA6 458 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 FTHL17Q9BXU8 183 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 ATP13A1Q9HD20 1204 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 WHRNQ9P202 907 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 KPNA3O00505 521 aaPredicted RBP13.84□□□□□ -0.19
TRAF3-208ENST00000560371 NR2C2P49116 596 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 MCL1Q07820 350 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 FNDC3BQ53EP0 1204 aaKnown RBP13.84□□□□□ -0.19
TRAF3-208ENST00000560371 FAM9CQ8IZT9 166 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 COLGALT1Q8NBJ5 622 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 ADAM32Q8TC27 787 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 USP17L7P0C7H9 530 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 OTOAQ7RTW8 1153 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 BBS7Q8IWZ6 715 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 TMEM86AQ8N2M4 240 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 DISP2A7MBM2 1401 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 RBAK-RBAKDNI3L0D1 243 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 GLRBP48167 497 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 PDZK1P1A8MUH7 402 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 PSMD12O00232 456 aaPredicted RBP13.84□□□□□ -0.19
TRAF3-208ENST00000560371 O00370 1275 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 GLRA3O75311 464 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 WBP4O75554 376 aaKnown RBP13.84□□□□□ -0.19
TRAF3-208ENST00000560371 PROSCO94903 275 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 TRPC1P48995 793 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 CHMP1BQ7LBR1 199 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRAF3-208ENST00000560371 CYP39A1Q9NYL5 469 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 USP20Q9Y2K6 914 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 DUSP10Q9Y6W6 482 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 DGKIO75912 1065 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 GSNP06396 782 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 MLH1P40692 756 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 CCNG1P51959 295 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 MPP3Q13368 585 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 FIGNQ5HY92 759 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 MED8Q96G25 268 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 ZNF558Q96NG5 402 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 OSGEPQ9NPF4 335 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 UBXN8O00124 270 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 POLR2EP19388 210 aaKnown RBP13.84□□□□□ -0.19
TRAF3-208ENST00000560371 UBA1P22314 1058 aaKnown RBP13.84□□□□□ -0.19
TRAF3-208ENST00000560371 CHI3L1P36222 383 aaPredicted RBP13.84□□□□□ -0.19
TRAF3-208ENST00000560371 ACOX1Q15067 660 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 IRAK1BP1Q5VVH5 260 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 PTAR1Q7Z6K3 402 aaPredicted RBP13.84□□□□□ -0.19
TRAF3-208ENST00000560371 DTX3LQ8TDB6 740 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 CELF6Q96J87 481 aaKnown RBP13.84□□□□□ -0.19
TRAF3-208ENST00000560371 HTATIP2Q9BUP3 242 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 KCNF1Q9H3M0 494 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 CYP4F12Q9HCS2 524 aa13.84□□□□□ -0.19
TRAF3-208ENST00000560371 LOC100653049A0A140TA62 436 aa13.83□□□□□ -0.19
TRAF3-208ENST00000560371 KRT34O76011 436 aa13.83□□□□□ -0.19
TRAF3-208ENST00000560371 PCNAP12004 261 aa13.83□□□□□ -0.19
TRAF3-208ENST00000560371 EIF4BP23588 611 aaKnown RBP13.83□□□□□ -0.19
TRAF3-208ENST00000560371 LRRC36Q1X8D7 754 aa13.83□□□□□ -0.19
TRAF3-208ENST00000560371 CBWD3Q5JTY5 395 aa13.83□□□□□ -0.19
TRAF3-208ENST00000560371 CBWD5Q5RIA9 395 aa13.83□□□□□ -0.19
TRAF3-208ENST00000560371 CCDC149Q6ZUS6 474 aa13.83□□□□□ -0.19
TRAF3-208ENST00000560371 CACUL1Q86Y37 369 aa13.83□□□□□ -0.19
TRAF3-208ENST00000560371 ACTL9Q8TC94 416 aa13.83□□□□□ -0.19
TRAF3-208ENST00000560371 PACSIN1Q9BY11 444 aa13.83□□□□□ -0.19
TRAF3-208ENST00000560371 BLOC1S6Q9UL45 172 aa13.83□□□□□ -0.19
TRAF3-208ENST00000560371 HPSEQ9Y251 543 aa13.83□□□□□ -0.19
TRAF3-208ENST00000560371 SF3B1O75533 1304 aaKnown RBP eCLIP13.83□□□□□ -0.21e-10■■■■■ 241.2
TRAF3-208ENST00000560371 ADGRB1O14514 1584 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 IMPDH2P12268 514 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 CCDC130P13994 396 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 SLC16A1P53985 500 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 PLIN5Q00G26 463 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 UBE3AQ05086 875 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 ARID3BQ8IVW6 561 aaPredicted RBP13.83□□□□□ -0.2
TRAF3-208ENST00000560371 CYGBQ8WWM9 190 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 ZBTB45Q96K62 511 aaPredicted RBP13.83□□□□□ -0.2
TRAF3-208ENST00000560371 FAM111AQ96PZ2 611 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 DCLK3Q9C098 648 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 PORCNQ9H237 461 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 SPATS2LQ9NUQ6 558 aaKnown RBP13.83□□□□□ -0.2
TRAF3-208ENST00000560371 MARCH2Q9P0N8 246 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 NDUFB5O43674 189 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 SKAP2O75563 359 aaPredicted RBP13.83□□□□□ -0.2
TRAF3-208ENST00000560371 SERPINI2O75830 405 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 ATP5C1P36542 298 aaKnown RBP13.83□□□□□ -0.2
TRAF3-208ENST00000560371 SLC12A3P55017 1021 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 MAP2K5Q13163 448 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 STX5Q13190 355 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 CYTH1Q15438 398 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 KHDRBS2Q5VWX1 349 aaKnown RBP13.83□□□□□ -0.2
TRAF3-208ENST00000560371 RINLQ6ZS11 566 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 GPR142Q7Z601 462 aa13.83□□□□□ -0.2
TRAF3-208ENST00000560371 AHCYL2Q96HN2 611 aaKnown RBP13.83□□□□□ -0.2
TRAF3-208ENST00000560371 FKBP1BP68106 108 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms