RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 PDCL3Q9H2J4 239 aa8.32□□□□□ -1.08
LINC00520-206ENST00000560336 SNTG2Q9NY99 539 aa8.32□□□□□ -1.08
LINC00520-206ENST00000560336 NOC2LQ9Y3T9 749 aaKnown RBP8.32□□□□□ -1.08
LINC00520-206ENST00000560336 NUB1Q9Y5A7 615 aa8.32□□□□□ -1.08
LINC00520-206ENST00000560336 NLRC5Q86WI3 1866 aa8.32□□□□□ -1.08
LINC00520-206ENST00000560336 ATP8B3O60423 1300 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 UMODL1Q5DID0 1318 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 DDX3XO00571 662 aaKnown RBP eCLIP8.31□□□□□ -1.08
LINC00520-206ENST00000560336 XPOTO43592 962 aaKnown RBP8.31□□□□□ -1.08
LINC00520-206ENST00000560336 BUB1O43683 1085 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 EFEMP2O95967 443 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 ASS1P00966 412 aaKnown RBP8.31□□□□□ -1.08
LINC00520-206ENST00000560336 ITGB3P05106 788 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 HOXA11P31270 313 aaPredicted RBP8.31□□□□□ -1.08
LINC00520-206ENST00000560336 NOP2P46087 812 aaKnown RBP8.31□□□□□ -1.08
LINC00520-206ENST00000560336 SLC14A2Q15849 920 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 ZNF667Q5HYK9 610 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 SCARA5Q6ZMJ2 495 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 NOP9Q86U38 636 aaKnown RBP8.31□□□□□ -1.08
LINC00520-206ENST00000560336 FAM228AQ86W67 206 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 KRTAP1-3Q8IUG1 177 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 FAM169BQ8N8A8 192 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 SH3TC2Q8TF17 1288 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 TAF4BQ92750 862 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 FCRL2Q96LA5 508 aaPredicted RBP8.31□□□□□ -1.08
LINC00520-206ENST00000560336 NOX5Q96PH1 765 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 PACSIN1Q9BY11 444 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 EPB41L4BQ9H329 900 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 PLEKHA5Q9HAU0 1116 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 APOBEC3GQ9HC16 384 aaKnown RBP8.31□□□□□ -1.08
LINC00520-206ENST00000560336 STARD7Q9NQZ5 370 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 DPP3Q9NY33 737 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 INTUQ9ULD6 942 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 AGAP1Q9UPQ3 857 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 YBX2Q9Y2T7 364 aaKnown RBP8.31□□□□□ -1.08
LINC00520-206ENST00000560336 DERAQ9Y315 318 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 C2CD2Q9Y426 696 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 DUSP10Q9Y6W6 482 aa8.31□□□□□ -1.08
LINC00520-206ENST00000560336 GRIN2DO15399 1336 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 TET1Q8NFU7 2136 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 UQCRHLA0A096LP55 91 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 A0A0U1RQG5 324 aaPredicted RBP8.3□□□□□ -1.08
LINC00520-206ENST00000560336 A0A1W2PQ45 241 aaPredicted RBP8.3□□□□□ -1.08
LINC00520-206ENST00000560336 A0A1W2PQY0 241 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 H0Y8X5 98 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 RTN2O75298 545 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 RECQL4O94761 1208 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 UQCRHP07919 91 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 MMEP08473 750 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 P4HA1P13674 534 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 CYP11B1P15538 503 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 ZSCAN20P17040 1043 aaPredicted RBP8.3□□□□□ -1.08
LINC00520-206ENST00000560336 ATF4P18848 351 aaPredicted RBP8.3□□□□□ -1.08
LINC00520-206ENST00000560336 CD58P19256 250 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 AKAP5P24588 427 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 ATICP31939 592 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 GALCP54803 685 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 RBP5P82980 135 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 CDR2Q01850 454 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 CWF19L1Q69YN2 538 aaKnown RBP8.3□□□□□ -1.08
LINC00520-206ENST00000560336 TMEM270Q6UE05 265 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 SYDE1Q6ZW31 735 aaPredicted RBP8.3□□□□□ -1.08
LINC00520-206ENST00000560336 SLC47A2Q86VL8 602 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 HACE1Q8IYU2 909 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 FIBCD1Q8N539 461 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 RNF10Q8N5U6 811 aaKnown RBP8.3□□□□□ -1.08
LINC00520-206ENST00000560336 FBXO15Q8NCQ5 510 aaPredicted RBP8.3□□□□□ -1.08
LINC00520-206ENST00000560336 BEST2Q8NFU1 509 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 MYRIPQ8NFW9 859 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 TRIM58Q8NG06 486 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 SLC30A5Q8TAD4 765 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 CTNNBL1Q8WYA6 563 aaPredicted RBP8.3□□□□□ -1.08
LINC00520-206ENST00000560336 SNX27Q96L92 541 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 SENP6Q9GZR1 1112 aaPredicted RBP8.3□□□□□ -1.08
LINC00520-206ENST00000560336 SLC6A17Q9H1V8 727 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 NXF3Q9H4D5 531 aaKnown RBP8.3□□□□□ -1.08
LINC00520-206ENST00000560336 AP5S1Q9NUS5 200 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 PUF60Q9UHX1 559 aaKnown RBP8.3□□□□□ -1.08
LINC00520-206ENST00000560336 NOCTQ9UK39 431 aaKnown RBP8.3□□□□□ -1.08
LINC00520-206ENST00000560336 ITGA11Q9UKX5 1188 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 ST3GAL5Q9UNP4 418 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 PTPN22Q9Y2R2 807 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 HES2Q9Y543 173 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 PCDHB2Q9Y5E7 798 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 PATJQ8NI35 1801 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 KIAA1671Q9BY89 1806 aa8.3□□□□□ -1.08
LINC00520-206ENST00000560336 VWA8A3KMH1 1905 aa8.29□□□□□ -1.08
LINC00520-206ENST00000560336 TTC3P53804 2025 aa8.29□□□□□ -1.08
LINC00520-206ENST00000560336 FAM170AA1A519 330 aa8.29□□□□□ -1.08
LINC00520-206ENST00000560336 BTNL10A8MVZ5 291 aa8.29□□□□□ -1.08
LINC00520-206ENST00000560336 MEFVO15553 781 aaPredicted RBP8.29□□□□□ -1.08
LINC00520-206ENST00000560336 THAP12O43422 761 aa8.29□□□□□ -1.08
LINC00520-206ENST00000560336 SLU7O95391 586 aaKnown RBP8.29□□□□□ -1.08
LINC00520-206ENST00000560336 CALCAP01258 141 aa8.29□□□□□ -1.08
LINC00520-206ENST00000560336 CHRNA1P02708 482 aa8.29□□□□□ -1.08
LINC00520-206ENST00000560336 TMEM253P0C7T8 217 aa8.29□□□□□ -1.08
LINC00520-206ENST00000560336 ITGA4P13612 1032 aa8.29□□□□□ -1.08
LINC00520-206ENST00000560336 CHRNB2P17787 502 aa8.29□□□□□ -1.08
LINC00520-206ENST00000560336 ACO1P21399 889 aaKnown RBP8.29□□□□□ -1.08
LINC00520-206ENST00000560336 ABCB4P21439 1286 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms