RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 SLC26A4O43511 780 aa14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 TTKP33981 857 aa14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 STK4Q13043 487 aa14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 AGKQ53H12 422 aa14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 OTUD3Q5T2D3 398 aaPredicted RBP14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 ERP44Q9BS26 406 aa14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 LRRC4BQ9NT99 713 aa14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 TRIM10Q9UDY6 481 aa14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 R3HDM2Q9Y2K5 976 aaKnown RBP14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 PCDHB7Q9Y5E2 793 aa14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 BBOX1O75936 387 aa14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 CYP2A7P20853 494 aa14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 CLEC4GQ6UXB4 293 aa14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 CHCHD6Q9BRQ6 235 aa14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 MMADHCQ9H3L0 296 aaPredicted RBP14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 SLC9A8Q9Y2E8 581 aa14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 GIT1Q9Y2X7 761 aa14.21□□□□□ -0.14
CSPG4P12-202ENST00000559989 INPP4BO15327 924 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 ATP6V1G2O95670 118 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 PRKCBP05771 671 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 CYP21A2P08686 494 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 PCSK1P29120 753 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 CEBPGP53567 150 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 WASHC2DQ5SRD0 308 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 DHFR2Q86XF0 187 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 ADHFE1Q8IWW8 467 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 UCMAQ8WVF2 138 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 NT5C1AQ9BXI3 368 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 COL17A1Q9UMD9 1497 aaPredicted RBP14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 MROH7Q68CQ1 1323 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 PRMT3O60678 531 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 TPBGLP0DKB5 382 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 IL13P35225 146 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 SLC26A3P40879 764 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 HALP42357 657 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 SLC11A2P49281 568 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 IRAK1P51617 712 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 PRKAA2P54646 552 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 NCOA4Q13772 614 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 PDIA6Q15084 440 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 PTGES3Q15185 160 aaKnown RBP14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 JAMLQ86YT9 394 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 FAM71DQ8N9W8 422 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 MINDY2Q8NBR6 621 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 OR6J1Q8NGC5 347 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 DPY30Q9C005 99 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 TPD52L2O43399 206 aaKnown RBP14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 MGAT5BQ3V5L5 792 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 KDM7AQ6ZMT4 941 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 POLNQ7Z5Q5 900 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 LEMD2Q8NC56 503 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 OR6Y1Q8NGX8 325 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 TMEM120AQ9BXJ8 343 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 SAE1Q9UBE0 346 aaPredicted RBP14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 XPR1Q9UBH6 696 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 MLXQ9UH92 298 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 AGAP1Q9UPQ3 857 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 OR7A10O76100 309 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 PTPN4P29074 926 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 HSD17B3P37058 310 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 NR6A1Q15406 480 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 GOLGA7BQ2TAP0 167 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 SNRNP48Q6IEG0 339 aaKnown RBP14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 DCP1BQ8IZD4 617 aaKnown RBP14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 MYDGFQ969H8 173 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 SLC38A2Q96QD8 506 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 WDCPQ9H6R7 721 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 MAGEB3O15480 346 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 CHN2P52757 468 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 TMEM132BQ14DG7 1078 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 USF2Q15853 346 aaPredicted RBP14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 C10orf120Q5SQS8 335 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 AKAP14Q86UN6 197 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 DGCR14Q96DF8 476 aaKnown RBP14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 NCKIPSDQ9NZQ3 722 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 RAD51CO43502 376 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 ACADMP11310 421 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 NPY2RP49146 381 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 FAM171BQ6P995 826 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 RIPOR1Q6ZS17 1223 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 ZNF655Q8N720 491 aaPredicted RBP14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 SLITRK1Q96PX8 696 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 LIMD1Q9UGP4 676 aa14.2□□□□□ -0.14
CSPG4P12-202ENST00000559989 RGS14O43566 566 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 ATP5BP06576 529 aaKnown RBP14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 SLC2A4P14672 509 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 STIP1P31948 543 aaKnown RBP14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 NLGN1Q8N2Q7 840 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 MEIOBQ8N635 442 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 TTC29Q8NA56 475 aaPredicted RBP14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 NEK7Q8TDX7 302 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 SGF29Q96ES7 293 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 RAVER2Q9HCJ3 691 aaKnown RBP14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 C8orf59Q8N0T1 100 aaPredicted RBP14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 ARL10Q8N8L6 244 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 POC5Q8NA72 575 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 HPS3Q969F9 1004 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 STOX2Q9P2F5 926 aaPredicted RBP14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 L1RE1Q9UN81 338 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 PLEKHA8P1O95397 391 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms