RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 CCDC130P13994 396 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 NPR3P17342 541 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 KRT4P19013 534 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 AKAP5P24588 427 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 CNTFP26441 200 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 RPA3P35244 121 aaPredicted RBP8.38□□□□□ -1.07
SMAD3-212ENST00000559937 CCNFP41002 786 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 SERPINB9P50453 376 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 NEK3P51956 506 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 GJA9P57773 515 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 LILRA4P59901 499 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 NCALDP61601 193 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 YWHAGP61981 247 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMAD3-212ENST00000559937 PURAQ00577 322 aaKnown RBP8.38□□□□□ -1.07
SMAD3-212ENST00000559937 SOX4Q06945 474 aaPredicted RBP8.38□□□□□ -1.07
SMAD3-212ENST00000559937 PTK7Q13308 1070 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 NAB1Q13506 487 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 SEMA5AQ13591 1074 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 HIC1Q14526 733 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 SLC1A5Q15758 541 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 ZKSCAN8Q15776 578 aaPredicted RBP8.38□□□□□ -1.07
SMAD3-212ENST00000559937 SEPT7Q16181 437 aaKnown RBP8.38□□□□□ -1.07
SMAD3-212ENST00000559937 HP1BP3Q5SSJ5 553 aaPredicted RBP8.38□□□□□ -1.07
SMAD3-212ENST00000559937 TTC39BQ5VTQ0 682 aaPredicted RBP8.38□□□□□ -1.07
SMAD3-212ENST00000559937 HEATR6Q6AI08 1181 aaKnown RBP8.38□□□□□ -1.07
SMAD3-212ENST00000559937 CYB5D1Q6P9G0 228 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 LVRNQ6Q4G3 990 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 CAPN12Q6ZSI9 719 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 OSTM1Q86WC4 334 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 CCNJLQ8IV13 435 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 TRIM42Q8IWZ5 723 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 C4orf33Q8N1A6 199 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 B3GALNT2Q8NCR0 500 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 SLC2A14Q8TDB8 520 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 TMEM40Q8WWA1 233 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 ZNF75CPQ92670 426 aaPredicted RBP8.38□□□□□ -1.07
SMAD3-212ENST00000559937 NTAN1Q96AB6 310 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 MTBPQ96DY7 904 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 OLFM3Q96PB7 478 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 CSPG4P5Q96PW8 444 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 SLC2A13Q96QE2 648 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 NPY6RQ99463 290 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 APOL6Q9BWW8 343 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 B3GNT5Q9BYG0 378 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 DHX35Q9H5Z1 703 aaKnown RBP8.38□□□□□ -1.07
SMAD3-212ENST00000559937 MLXIPLQ9NP71 852 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 CHST12Q9NRB3 414 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 TXLNGQ9NUQ3 528 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 ABCF3Q9NUQ8 709 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 WBP1LQ9NX94 342 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 RRN3Q9NYV6 651 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 GJD2Q9UKL4 321 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 ABT1Q9ULW3 272 aaKnown RBP8.38□□□□□ -1.07
SMAD3-212ENST00000559937 PHTF1Q9UMS5 762 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 GINS2Q9Y248 185 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 HEY1Q9Y5J3 304 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 TRPV2Q9Y5S1 764 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 PTCH2Q9Y6C5 1203 aa8.38□□□□□ -1.07
SMAD3-212ENST00000559937 MYO18AQ92614 2054 aaKnown RBP8.38□□□□□ -1.07
SMAD3-212ENST00000559937 A0A0A0MRY4 1105 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 FAM159BA6NKW6 160 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 PTGESO14684 152 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 KLF11O14901 512 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 CHUKO15111 745 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 HNRNPCL1O60812 293 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 OPHN1O60890 802 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 DUSP11O75319 330 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 KRT38O76015 456 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 APOEP02649 317 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 C1QAP02745 245 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 SNRPAP09012 282 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 PDGFRBP09619 1106 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 DHRS4L1P0CG22 281 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 TROVE2P10155 538 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 LCP1P13796 627 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 AKR1A1P14550 325 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 PTPN1P18031 435 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 LMO2P25791 158 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 TKTP29401 623 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 LHX1P48742 406 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 HCAR3P49019 387 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 GLUD2P49448 558 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 SULT1E1P49888 294 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 INHBEP58166 350 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 NKX3-2P78367 333 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 ELF3P78545 371 aaPredicted RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 MRPS5P82675 430 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 MRPS6P82932 125 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 ADCY1Q08828 1119 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 DNAJC3Q13217 504 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 EFTUD2Q15029 972 aaKnown RBP eCLIP8.37□□□□□ -1.072e-6■■■■□ 23
SMAD3-212ENST00000559937 SETDB1Q15047 1291 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 PAFAH1B3Q15102 231 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 PDK1Q15118 436 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 TAF1CQ15572 869 aaPredicted RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 DBN1Q16643 649 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 FSCN1Q16658 493 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 KBTBD12Q3ZCT8 623 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 PPP6R3Q5H9R7 873 aaPredicted RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 PRAMEF19Q5SWL8 479 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms