RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 CACNG3O60359 315 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 RPP40O75818 363 aaKnown RBP13.17□□□□□ -0.3
LRRC28-214ENST00000559433 GABBR2O75899 941 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 ALDH1A2O94788 518 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 FBXO21O94952 628 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 LETM1O95202 739 aaPredicted RBP13.17□□□□□ -0.3
LRRC28-214ENST00000559433 APBB3O95704 486 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 KLKB1P03952 638 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 RETP07949 1114 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 TYRP14679 529 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 SDHBP21912 280 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 TNFRSF4P43489 277 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 MRPS21P82921 87 aaKnown RBP13.17□□□□□ -0.3
LRRC28-214ENST00000559433 KCNJ12Q14500 433 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 VWA3BQ502W6 1294 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 MIIPQ5JXC2 388 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 GRAMD4Q6IC98 578 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 DENND1BQ6P3S1 775 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 CACNA2D4Q7Z3S7 1137 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 FMNL3Q8IVF7 1028 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 PHTF2Q8N3S3 785 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 CCDC33Q8N5R6 958 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 TSTD1Q8NFU3 115 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 CLEC4CQ8WTT0 213 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 IRGQQ8WZA9 623 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 GOLGA1Q92805 767 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 RNF25Q96BH1 459 aaPredicted RBP13.17□□□□□ -0.3
LRRC28-214ENST00000559433 PLD4Q96BZ4 506 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 HSFY1Q96LI6 401 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 NDST4Q9H3R1 872 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 ST7Q9NRC1 585 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 ABCC13Q9NSE7 274 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 DNAJC17Q9NVM6 304 aaKnown RBP13.17□□□□□ -0.3
LRRC28-214ENST00000559433 MARK1Q9P0L2 795 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 MMP17Q9ULZ9 603 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 GPR179Q6PRD1 2367 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 RALGAPA1Q6GYQ0 2036 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 ANTXRLA6NF34 631 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 BECN2A8MW95 431 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 KLF8O95600 359 aaPredicted RBP13.16□□□□□ -0.3
LRRC28-214ENST00000559433 TIE1P35590 1138 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 GPD2P43304 727 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 DGKEP52429 567 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 MEA1Q16626 185 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 USP39Q53GS9 565 aaKnown RBP13.16□□□□□ -0.3
LRRC28-214ENST00000559433 TCP11X2Q5H9J9 407 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 C10orf76Q5T2E6 689 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 SDE2Q6IQ49 451 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 RBM43Q6ZSC3 357 aaKnown RBP13.16□□□□□ -0.3
LRRC28-214ENST00000559433 DENND1CQ8IV53 801 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 ALLCQ8N6M5 410 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 TERB1Q8NA31 727 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 GAB3Q8WWW8 586 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 ZNF606Q8WXB4 792 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 SHC3Q92529 594 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 MIS12Q9H081 205 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 SIX2Q9NPC8 291 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 ACP6Q9NPH0 428 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 SAMSN1Q9NSI8 373 aaKnown RBP13.16□□□□□ -0.3
LRRC28-214ENST00000559433 PLK2Q9NYY3 685 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 SFMBT1Q9UHJ3 866 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 AJAP1Q9UKB5 411 aaPredicted RBP13.16□□□□□ -0.3
LRRC28-214ENST00000559433 AGO1Q9UL18 857 aaKnown RBP13.16□□□□□ -0.3
LRRC28-214ENST00000559433 HBS1LQ9Y450 684 aaKnown RBP13.16□□□□□ -0.3
LRRC28-214ENST00000559433 NFE2L3Q9Y4A8 694 aa13.16□□□□□ -0.3
LRRC28-214ENST00000559433 A0A0A0MRY4 1105 aa13.15□□□□□ -0.3
LRRC28-214ENST00000559433 PRR5-ARHGAP8B1AHC4 643 aa13.15□□□□□ -0.3
LRRC28-214ENST00000559433 TRIM24O15164 1050 aa13.15□□□□□ -0.3
LRRC28-214ENST00000559433 MSI1O43347 362 aaKnown RBP13.15□□□□□ -0.3
LRRC28-214ENST00000559433 MBD3O95983 291 aa13.15□□□□□ -0.3
LRRC28-214ENST00000559433 LTFP02788 710 aa13.15□□□□□ -0.3
LRRC28-214ENST00000559433 EEF1GP26641 437 aaKnown RBP13.15□□□□□ -0.3
LRRC28-214ENST00000559433 CHKAP35790 457 aa13.15□□□□□ -0.3
LRRC28-214ENST00000559433 KIR2DL1P43626 348 aaPredicted RBP13.15□□□□□ -0.3
LRRC28-214ENST00000559433 HARS2P49590 506 aaKnown RBP13.15□□□□□ -0.3
LRRC28-214ENST00000559433 ARHGAP8P85298 464 aa13.15□□□□□ -0.3
LRRC28-214ENST00000559433 HSF5Q4G112 596 aaPredicted RBP13.15□□□□□ -0.3
LRRC28-214ENST00000559433 EOGTQ5NDL2 527 aa13.15□□□□□ -0.3
LRRC28-214ENST00000559433 EMC10Q5UCC4 262 aa13.15□□□□□ -0.3
LRRC28-214ENST00000559433 SASS6Q6UVJ0 657 aa13.15□□□□□ -0.3
LRRC28-214ENST00000559433 TRMT11Q7Z4G4 463 aaKnown RBP13.15□□□□□ -0.3
LRRC28-214ENST00000559433 IL17RCQ8NAC3 791 aa13.15□□□□□ -0.3
LRRC28-214ENST00000559433 TXNDC5Q8NBS9 432 aaKnown RBP13.15□□□□□ -0.3
LRRC28-214ENST00000559433 ENOX1Q8TC92 643 aaKnown RBP13.15□□□□□ -0.3
LRRC28-214ENST00000559433 POLMQ9NP87 494 aaPredicted RBP13.15□□□□□ -0.3
LRRC28-214ENST00000559433 ZDHHC4Q9NPG8 344 aa13.15□□□□□ -0.3
LRRC28-214ENST00000559433 DNAJC12Q9UKB3 198 aa13.15□□□□□ -0.3
LRRC28-214ENST00000559433 SGK1O00141 431 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 SART1O43290 800 aaKnown RBP13.14□□□□□ -0.31
LRRC28-214ENST00000559433 FOXD2O60548 495 aaPredicted RBP13.14□□□□□ -0.31
LRRC28-214ENST00000559433 RHOBTB1O94844 696 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 CYBBP04839 570 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 CHRM1P11229 460 aaPredicted RBP13.14□□□□□ -0.31
LRRC28-214ENST00000559433 ACADSBP45954 432 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 RPL34P49207 117 aaKnown RBP13.14□□□□□ -0.31
LRRC28-214ENST00000559433 DGKGP49619 791 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 LMNB2Q03252 620 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 SPEM2Q0P670 501 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 TRIP4Q15650 581 aaPredicted RBP13.14□□□□□ -0.31
LRRC28-214ENST00000559433 ELF2Q15723 593 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms