RNA–Protein interactions for RNA: ENST00000558843.5

COPS2-205, Transcript of COP9 signalosome subunit 2, human

TSL 1 (best)

Gene COPS2, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS2-205	ENST00000558843	ODR4	Q5SWX8	454 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	GFI1B	Q5VTD9	330 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	PPP4R4	Q6NUP7	873 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	PDXDC1	Q6P996	788 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	RBM44	Q6ZP01	1051 aa	Known RBP	4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	NR2C2AP	Q86WQ0	139 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	MICU3	Q86XE3	530 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	SPATA2L	Q8IUW3	424 aa	Predicted RBP	4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	FAM71D	Q8N9W8	422 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	PPP1R35	Q8TAP8	253 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	MSI2	Q96DH6	328 aa	Known RBP	4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	MED30	Q96HR3	178 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	VPS50	Q96JG6	964 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	RHOBTB2	Q9BYZ6	727 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	GJB4	Q9NTQ9	266 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	STEAP1	Q9UHE8	339 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	NOB1	Q9ULX3	412 aa	Known RBP	4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	PCDHA7	Q9UN72	937 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	SPATA31A1	Q5TZJ5	1347 aa		4.39	□□□□□ -1.71
COPS2-205	ENST00000558843	TRBV5-3	A0A0A0MS03	114 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	PYCARD-AS1	I3L0S3	204 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	ACOT8	O14734	319 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	TBX3	O15119	743 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	CTNND1	O60716	968 aa	Known RBP	4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	RASSF9	O75901	435 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	IGKV3-20	P01619	116 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	ST6GAL1	P15907	406 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	KLRC1	P26715	233 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	HOXA11	P31270	313 aa	Predicted RBP	4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	GALNS	P34059	522 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	EIF4A1	P60842	406 aa	Known RBP	4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	WDR5	P61964	334 aa	Known RBP	4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	CCDC15	Q0P6D6	951 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	STK3	Q13188	491 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	MTA1	Q13330	715 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	ARHGEF7	Q14155	803 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	NUGGC	Q68CJ6	796 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	CUZD1	Q86UP6	607 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	IQCF1	Q8N6M8	205 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	NUDCD2	Q8WVJ2	157 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	STAG1	Q8WVM7	1258 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	NEUROG1	Q92886	237 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	NTPCR	Q9BSD7	190 aa	Known RBP	4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	CINP	Q9BW66	212 aa	Predicted RBP	4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	ATP6V0A4	Q9HBG4	840 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	VPS45	Q9NRW7	570 aa		4.38	□□□□□ -1.71
COPS2-205	ENST00000558843	ATG13	O75143	517 aa		4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	MBP	P02686	304 aa	Predicted RBP	4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	S100B	P04271	92 aa	Predicted RBP	4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	SLC7A1	P30825	629 aa		4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	NTSR1	P30989	418 aa		4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	NFATC4	Q14934	902 aa		4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	B3GNT9	Q6UX72	402 aa		4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	IL31RA	Q8NI17	732 aa		4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	ZNF668	Q96K58	619 aa	Predicted RBP	4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	AIFM3	Q96NN9	605 aa		4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	ACO2	Q99798	780 aa	Known RBP	4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	RBM38	Q9H0Z9	239 aa	Known RBP	4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	MOV10	Q9HCE1	1003 aa	Known RBP	4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	TCEAL9	Q9UHQ7	104 aa		4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	ANAPC4	Q9UJX5	808 aa		4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	AGO2	Q9UKV8	859 aa	Known RBP	4.37	□□□□□ -1.71
COPS2-205	ENST00000558843	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	TRIM43B	A6NCK2	446 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	UGDH	O60701	494 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	KEAP1	Q14145	624 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	CLEC9A	Q6UXN8	241 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	TRAPPC11	Q7Z392	1133 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	ANKRD13A	Q8IZ07	590 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	ADGRF4	Q8IZF3	695 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	ZBTB34	Q8NCN2	500 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	SLC35G2	Q8TBE7	412 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	OIT3	Q8WWZ8	545 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	P2RY11	Q96G91	374 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	HIST1H2AA	Q96QV6	131 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	STK31	Q9BXU1	1019 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	CDH19	Q9H159	772 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	DHX36	Q9H2U1	1008 aa	Known RBP	4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	STK32B	Q9NY57	414 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	HDAC9	Q9UKV0	1011 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	SLC27A6	Q9Y2P4	619 aa		4.36	□□□□□ -1.71
COPS2-205	ENST00000558843	PRSS47	A8MTI9	375 aa		4.35	□□□□□ -1.71
COPS2-205	ENST00000558843	TNFRSF13B	O14836	293 aa	Predicted RBP	4.35	□□□□□ -1.71
COPS2-205	ENST00000558843	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.35	□□□□□ -1.71
COPS2-205	ENST00000558843	TFEB	P19484	476 aa		4.35	□□□□□ -1.71
COPS2-205	ENST00000558843	ACVR2A	P27037	513 aa		4.35	□□□□□ -1.71
COPS2-205	ENST00000558843	IDUA	P35475	653 aa		4.35	□□□□□ -1.71
COPS2-205	ENST00000558843	AGFG1	P52594	562 aa	Known RBP	4.35	□□□□□ -1.71
COPS2-205	ENST00000558843	RAE1	P78406	368 aa	Known RBP	4.35	□□□□□ -1.71
COPS2-205	ENST00000558843	LTB	Q06643	244 aa		4.35	□□□□□ -1.71
COPS2-205	ENST00000558843	ARHGAP29	Q52LW3	1261 aa		4.35	□□□□□ -1.71
COPS2-205	ENST00000558843	GRHL2	Q6ISB3	625 aa		4.35	□□□□□ -1.71
COPS2-205	ENST00000558843	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.35	□□□□□ -1.71
COPS2-205	ENST00000558843	PRR11	Q96HE9	360 aa	Predicted RBP	4.35	□□□□□ -1.71
COPS2-205	ENST00000558843	SUCLG2	Q96I99	432 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms