RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 AGAP9Q5VTM2 703 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 RNF19BQ6ZMZ0 732 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 TMEM26Q6ZUK4 368 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 PARP8Q8N3A8 854 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 RELTQ969Z4 430 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 RSAD1Q9HA92 442 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 MYO5CQ9NQX4 1742 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 SLC12A8A0AV02 714 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 CENPXA8MT69 81 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 NUDT14O95848 222 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 CALCAP01258 141 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 CD4P01730 458 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 NFICP08651 508 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 FCGRTP55899 365 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 PDK1Q15118 436 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 FAM228AQ86W67 206 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 C7orf25Q9BPX7 421 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 FICDQ9BVA6 458 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 BCL2L14Q9BZR8 327 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 ERAP1Q9NZ08 941 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 TRPC4Q9UBN4 977 aa14.33□□□□□ -0.11
SPG11-210ENST00000558319 IL6P05231 212 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 HPGDP15428 266 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 H2AFXP16104 143 aaPredicted RBP14.33□□□□□ -0.12
SPG11-210ENST00000558319 LRRN4Q8WUT4 740 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 KRT35Q92764 455 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 GPRASP2Q96D09 838 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 TMEM169Q96HH4 297 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 PAFAH2Q99487 392 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 PHF20Q9BVI0 1012 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 RIBC2Q9H4K1 309 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 CYP39A1Q9NYL5 469 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 VPS28Q9UK41 221 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 FBXO10Q9UK96 956 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 PDS5AQ29RF7 1337 aaKnown RBP14.33□□□□□ -0.12
SPG11-210ENST00000558319 LCA5LO95447 670 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 GARTP22102 1010 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 ABATP80404 500 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 C1DQ13901 141 aaKnown RBP14.33□□□□□ -0.12
SPG11-210ENST00000558319 DGCR6Q14129 220 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 CTXN3Q4LDR2 81 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 NECAB2Q7Z6G3 386 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 DCP1BQ8IZD4 617 aaKnown RBP14.33□□□□□ -0.12
SPG11-210ENST00000558319 OR6Y1Q8NGX8 325 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 OSMRQ99650 979 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 BTBD10Q9BSF8 475 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 TBKBP1A7MCY6 615 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.33□□□□□ -0.12
SPG11-210ENST00000558319 LSM1O15116 133 aaKnown RBP14.33□□□□□ -0.12
SPG11-210ENST00000558319 INPP4BO15327 924 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 RHOBTB3O94955 611 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 CBX6O95503 412 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 ODC1P11926 461 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 CNTN1Q12860 1018 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 CAMK2GQ13555 558 aaPredicted RBP14.33□□□□□ -0.12
SPG11-210ENST00000558319 ANKS6Q68DC2 871 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 DPP10Q8N608 796 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 PYDC1Q8WXC3 89 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 ATXN3LQ9H3M9 355 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 CAPN6Q9Y6Q1 641 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 F5H5T6 163 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 O00370 1275 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 TNFAIP8O95379 198 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 MAGEA10P43363 369 aaPredicted RBP14.33□□□□□ -0.12
SPG11-210ENST00000558319 NCKAP1LP55160 1127 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 ACOX2Q99424 681 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 MYLK2Q9H1R3 596 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 ZNF609O15014 1411 aa14.33□□□□□ -0.12
SPG11-210ENST00000558319 PSMD11O00231 422 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 GSTT1P30711 240 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 GCLCP48506 637 aaPredicted RBP14.32□□□□□ -0.12
SPG11-210ENST00000558319 DGUOKQ16854 277 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 FAM131BQ86XD5 332 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 MYRFQ9Y2G1 1151 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 FASP25445 335 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 KLHDC7AQ5VTJ3 777 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 C3orf20Q8ND61 904 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 PHF21BQ96EK2 531 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 MTIF3Q9H2K0 278 aaKnown RBP14.32□□□□□ -0.12
SPG11-210ENST00000558319 CLOCKO15516 846 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 EXTL3O43909 919 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 KLHL12Q53G59 568 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 CLEC17AQ6ZS10 378 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 PPP1R10Q96QC0 940 aaKnown RBP14.32□□□□□ -0.12
SPG11-210ENST00000558319 RMND5AQ9H871 391 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 SETD4Q9NVD3 440 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 SNTG2Q9NY99 539 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 A0A1W2PQJ5 194 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 RAD51BO15315 384 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 HALP42357 657 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 ALDH5A1P51649 535 aaPredicted RBP14.32□□□□□ -0.12
SPG11-210ENST00000558319 AP3M2P53677 418 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 PDGFDQ9GZP0 370 aaPredicted RBP14.32□□□□□ -0.12
SPG11-210ENST00000558319 RPS6KB2Q9UBS0 482 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 LOC100506127A0A0U1RQW1 187 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 SMIM31A0A1B0GVY4 71 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 SNTNA6NMZ2 147 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 H2AFYO75367 372 aaKnown RBP14.32□□□□□ -0.12
SPG11-210ENST00000558319 ARP10275 920 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 STRIP1Q5VSL9 837 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms