RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SEMG2Q02383 582 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 ST3GAL1Q11201 340 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 ORC1Q13415 861 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 ALCAMQ13740 583 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 FUT11Q495W5 492 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 TAF1BQ53T94 588 aaPredicted RBP5.48□□□□□ -1.53
SPG11-208ENST00000558155 L1TD1Q5T7N2 865 aaKnown RBP5.48□□□□□ -1.53
SPG11-208ENST00000558155 LCE2AQ5TA79 106 aaPredicted RBP5.48□□□□□ -1.53
SPG11-208ENST00000558155 SCARA3Q6AZY7 606 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 GPD1LQ8N335 351 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 C1orf216Q8TAB5 229 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 KBTBD7Q8WVZ9 684 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 LARP4BQ92615 738 aaKnown RBP5.48□□□□□ -1.53
SPG11-208ENST00000558155 IGSF8Q969P0 613 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 SKA1Q96BD8 255 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 WBP1Q96G27 269 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 B3GNT5Q9BYG0 378 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 MTMR12Q9C0I1 747 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 PCIF1Q9H4Z3 704 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 CCSER2Q9H7U1 834 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 OSGEPQ9NPF4 335 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 CD93Q9NPY3 652 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 TLR8Q9NR97 1041 aaKnown RBP5.48□□□□□ -1.53
SPG11-208ENST00000558155 IL37Q9NZH6 218 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 THAP10Q9P2Z0 257 aaPredicted RBP5.48□□□□□ -1.53
SPG11-208ENST00000558155 FTSJ1Q9UET6 329 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 FBXO10Q9UK96 956 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 BTBD3Q9Y2F9 522 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 ZNF510Q9Y2H8 683 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 KIF3AQ9Y496 699 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 SNX11Q9Y5W9 270 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 KCNJ18B7U540 433 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 ERVH48-1M5A8F1 160 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 CLDN5O00501 218 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 KCNK3O14649 394 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 ENC1O14682 589 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 PAPSS1O43252 624 aaPredicted RBP5.47□□□□□ -1.53
SPG11-208ENST00000558155 TLX3O43711 291 aaPredicted RBP5.47□□□□□ -1.53
SPG11-208ENST00000558155 TLR5O60602 858 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 GCNT3O95395 438 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 BMP15O95972 392 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 IGLV3-19P01714 112 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 ZDHHC11BP0C7U3 371 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 ACO1P21399 889 aaKnown RBP5.47□□□□□ -1.53
SPG11-208ENST00000558155 CHKAP35790 457 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 LONP1P36776 959 aaKnown RBP5.47□□□□□ -1.53
SPG11-208ENST00000558155 IL12RB1P42701 662 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 GRIA4P48058 902 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 CCT8P50990 548 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 CDH8P55286 799 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 C21orf59P57076 290 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 COPS2P61201 443 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 TNNC1P63316 161 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 RHDQ02161 417 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 ARID5AQ03989 594 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 KCNA1Q09470 495 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 TARDBPQ13148 414 aaKnown RBP eCLIP5.47□□□□□ -1.53
SPG11-208ENST00000558155 TRPC3Q13507 836 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 RTP5Q14D33 572 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 WDR72Q3MJ13 1102 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 DYMQ7RTS9 669 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 TRAPPC11Q7Z392 1133 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 ADAT2Q7Z6V5 191 aaKnown RBP5.47□□□□□ -1.53
SPG11-208ENST00000558155 FAM124AQ86V42 546 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 SFR1Q86XK3 245 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 B3GALNT2Q8NCR0 500 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 ZSWIM2Q8NEG5 633 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 SCAMP5Q8TAC9 235 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 SNIP1Q8TAD8 396 aaKnown RBP5.47□□□□□ -1.53
SPG11-208ENST00000558155 SNX19Q92543 992 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 WBP2Q969T9 261 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 TMEM176AQ96HP8 235 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 KCNK16Q96T55 309 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 MRPL45Q9BRJ2 306 aaKnown RBP5.47□□□□□ -1.53
SPG11-208ENST00000558155 MED10Q9BTT4 135 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 STRA6Q9BX79 667 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 KLF16Q9BXK1 252 aaPredicted RBP5.47□□□□□ -1.53
SPG11-208ENST00000558155 ZNF518BQ9C0D4 1074 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 MKRN2Q9H000 416 aaKnown RBP5.47□□□□□ -1.53
SPG11-208ENST00000558155 IKZF4Q9H2S9 585 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 FBXO44Q9H4M3 255 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 CLMPQ9H6B4 373 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 KIAA1586Q9HCI6 787 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 ELOVL2Q9NXB9 296 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 TBC1D7Q9P0N9 293 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 GMIPQ9P107 970 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 CCDC39Q9UFE4 941 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 SLC27A6Q9Y2P4 619 aa5.47□□□□□ -1.53
SPG11-208ENST00000558155 MYLKQ15746 1914 aa5.46□□□□□ -1.53
SPG11-208ENST00000558155 TMEM131Q92545 1883 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 FAM92AA1XBS5 289 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 B8ZZF3 427 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 H0Y8X5 98 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 H3BQV1 296 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 ARHGAP6O43182 974 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 GREM1O60565 184 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 RFPL3O75679 317 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 TBX18O95935 607 aa5.46□□□□□ -1.54
SPG11-208ENST00000558155 CST3P01034 146 aaPredicted RBP5.46□□□□□ -1.54
SPG11-208ENST00000558155 CYBBP04839 570 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms