RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 TRIP13Q15645 432 aaPredicted RBP11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 CHRNA2Q15822 529 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 IQSEC1Q6DN90 963 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 GTF2IRD2BQ6EKJ0 949 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 GTF2IRD2Q86UP8 949 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 SNX29P2Q8IUI4 249 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 RTKN2Q8IZC4 609 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 TRIM63Q969Q1 353 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 TTC25Q96NG3 672 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 SNX18Q96RF0 628 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 INTS7Q9NVH2 962 aaKnown RBP11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 SENP1Q9P0U3 644 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 ACTR3BQ9P1U1 418 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 TSPOAP1O95153 1857 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 A0A0G2JND7 137 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 A0A1W2PQ72 361 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 BTNL10A8MVZ5 291 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 SNAP91O60641 907 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 SORBS2O94875 1100 aaKnown RBP11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 TTLL1O95922 423 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 GFAPP14136 432 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 CYP3A5P20815 502 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 OVGP1Q12889 678 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 TRIM28Q13263 835 aaKnown RBP11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 SDE2Q6IQ49 451 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 TRMT10CQ7L0Y3 403 aaKnown RBP11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 LARGE2Q8N3Y3 721 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 FLCNQ8NFG4 579 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 ZNF420Q8TAQ5 688 aaPredicted RBP11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 RSAD2Q8WXG1 361 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 NELL1Q92832 810 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 HDAC11Q96DB2 347 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 EEF2KMTQ96G04 330 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 NAPBQ9H115 298 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 RAD21L1Q9H4I0 556 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 TRIM39Q9HCM9 518 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 NAALADL1Q9UQQ1 740 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 MAN2B2Q9Y2E5 1009 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 ANKRD36CQ5JPF3 1778 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 UBE2Q2LH0YL09 131 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 TOR1AO14656 332 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 PGK2P07205 417 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 GRIA3P42263 894 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 CALCOCO2Q13137 446 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 AP3B2Q13367 1082 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 PON2Q15165 354 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 MCMDC2Q4G0Z9 681 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 UTS2BQ765I0 119 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 EID3Q8N140 333 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 SLC47A1Q96FL8 570 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 AK8Q96MA6 479 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 FRMD8Q9BZ67 464 aaPredicted RBP11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 NMUR2Q9GZQ4 415 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 MCCC2Q9HCC0 563 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 SMG5Q9UPR3 1016 aaKnown RBP11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 MROH2AA6NES4 1674 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 FOXN3O00409 490 aaPredicted RBP11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 FCHO1O14526 889 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 ST8SIA5O15466 376 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 PDPK1O15530 556 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 VNN1O95497 513 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 ZNF182P17025 639 aaPredicted RBP11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 SHMT1P34896 483 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 CPOXP36551 454 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 IRX4P78413 519 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 DHX34Q14147 1143 aaKnown RBP11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 DLGAP5Q15398 846 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 DNAL1Q4LDG9 190 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 PLEKHG7Q6ZR37 379 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 CCDC25Q86WR0 208 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 SGK3Q96BR1 496 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 TSG101Q99816 390 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 NANOGQ9H9S0 305 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 MAT2BQ9NZL9 334 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 MAP3K2Q9Y2U5 619 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 RNF103O00237 685 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 AREL1O15033 823 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 PRPF4O43172 522 aaKnown RBP eCLIP11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 CCNT2O60583 730 aaKnown RBP11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 PTCD1O75127 700 aaKnown RBP11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 FGAP02671 866 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 KRT3P12035 628 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 NCAM1P13591 858 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 TATP17735 454 aaPredicted RBP11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 GARTP22102 1010 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 AXLP30530 894 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 OLR1P78380 273 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 GHRHRQ02643 423 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 RELQ04864 619 aaPredicted RBP11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 RAD51Q06609 339 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 PDXDC2PQ6P474 469 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 PGM2L1Q6PCE3 622 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 CCDC33Q8N5R6 958 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 PHOSPHO2Q8TCD6 241 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 EPS8L1Q8TE68 723 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 TMEM80Q96HE8 168 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 ZNF347Q96SE7 839 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 GON7Q9BXV9 100 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 RHOBTB2Q9BYZ6 727 aa11.37□□□□□ -0.59
SEMA4B-204ENST00000558065 NAA50Q9GZZ1 169 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms