RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 SORCS1Q8WY21 1168 aa10.22□□□□□ -0.77
IGKV2D-28-202ENST00000558026 SPATA17Q96L03 361 aa10.22□□□□□ -0.77
IGKV2D-28-202ENST00000558026 ACBD6Q9BR61 282 aa10.22□□□□□ -0.77
IGKV2D-28-202ENST00000558026 FUCA2Q9BTY2 467 aa10.22□□□□□ -0.77
IGKV2D-28-202ENST00000558026 TTLL2Q9BWV7 592 aa10.22□□□□□ -0.77
IGKV2D-28-202ENST00000558026 BTBD1Q9H0C5 482 aa10.22□□□□□ -0.77
IGKV2D-28-202ENST00000558026 CAAP1Q9H8G2 361 aa10.22□□□□□ -0.77
IGKV2D-28-202ENST00000558026 L1RE1Q9UN81 338 aa10.22□□□□□ -0.77
IGKV2D-28-202ENST00000558026 TDRD6O60522 2096 aaKnown RBP10.22□□□□□ -0.77
IGKV2D-28-202ENST00000558026 SDK2Q58EX2 2172 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 A0A1B0GTL3 188 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 A0A1W2PPC4 97 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 A0A1W2PR77 199 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 VPS37CA5D8V6 355 aaPredicted RBP10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 TNFSF15O95150 251 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 DEXIO95424 95 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 EPHX1P07099 455 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 WT1P19544 449 aaPredicted RBP10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 ACO1P21399 889 aaKnown RBP10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 CD38P28907 300 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 MAGEA11P43364 429 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 UQCRFS1P47985 274 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 CDH8P55286 799 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 STRN3Q13033 797 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 MAPK7Q13164 816 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 SCARA3Q6AZY7 606 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 ZPBP2Q6X784 338 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 CLEC14AQ86T13 490 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 SPATS2Q86XZ4 545 aaKnown RBP10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 ZNF366Q8N895 744 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 TMEM60Q9H2L4 133 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 RWDD1Q9H446 243 aaPredicted RBP10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 RBM19Q9Y4C8 960 aaKnown RBP10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 PCDHGA4Q9Y5G9 962 aa10.21□□□□□ -0.77
IGKV2D-28-202ENST00000558026 MTSS1O43312 755 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 NEMFO60524 1076 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 RPA1P27694 616 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 PDIA3P30101 505 aaKnown RBP10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 MYH11P35749 1972 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 RXRGP48443 463 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 ZNF132P52740 706 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 NXPH1P58417 271 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 PSMC1P62191 440 aaKnown RBP10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 NR5A1Q13285 461 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 ZNF211Q13398 564 aaPredicted RBP10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 SV2CQ496J9 727 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 RNF20Q5VTR2 975 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 VASH2Q86V25 355 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 SLC25A45Q8N413 288 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 OR2T3Q8NH03 318 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 SSC4DQ8WTU2 575 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 MYLPFQ96A32 169 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 MIB2Q96AX9 1013 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 SKA1Q96BD8 255 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 FUBP3Q96I24 572 aaKnown RBP eCLIP10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 ESYT1Q9BSJ8 1104 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 CCSER2Q9H7U1 834 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 DPP3Q9NY33 737 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 WDR35Q9P2L0 1181 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 TJP2Q9UDY2 1190 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 PCDHGA8Q9Y5G5 932 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 ENTPD2Q9Y5L3 495 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 SNX14Q9Y5W7 946 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 HIVEP1P15822 2718 aa10.2□□□□□ -0.78
IGKV2D-28-202ENST00000558026 PDZD2O15018 2839 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 F8VP50 259 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 TLR4O00206 839 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 OGTO15294 1046 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 FFAR2O15552 330 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 GREM1O60565 184 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 THEGLP0DJG4 465 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 MAPTP10636 758 aaKnown RBP10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 TGM2P21980 687 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 ANXA13P27216 316 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 PPP3CCP48454 512 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 KCNJ12Q14500 433 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 ZC3H18Q86VM9 953 aaKnown RBP10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 TMEM161BQ8NDZ6 487 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 BICD1Q96G01 975 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 RUSC1Q9BVN2 902 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 ABCG4Q9H172 646 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 TMEM30AQ9NV96 361 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 MARK1Q9P0L2 795 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 MAGEC2Q9UBF1 373 aaPredicted RBP10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 ANAPC2Q9UJX6 822 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 MTORP42345 2549 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 MED13LQ71F56 2210 aa10.19□□□□□ -0.78
IGKV2D-28-202ENST00000558026 CASC3O15234 703 aaKnown RBP10.18□□□□□ -0.78
IGKV2D-28-202ENST00000558026 SEMA7AO75326 666 aa10.18□□□□□ -0.78
IGKV2D-28-202ENST00000558026 CKMT1AP12532 417 aa10.18□□□□□ -0.78
IGKV2D-28-202ENST00000558026 CACNA2D1P54289 1103 aa10.18□□□□□ -0.78
IGKV2D-28-202ENST00000558026 MFAP3P55082 362 aa10.18□□□□□ -0.78
IGKV2D-28-202ENST00000558026 RPS14P62263 151 aaKnown RBP10.18□□□□□ -0.78
IGKV2D-28-202ENST00000558026 NOP14P78316 857 aaKnown RBP10.18□□□□□ -0.78
IGKV2D-28-202ENST00000558026 CAMK2GQ13555 558 aaPredicted RBP10.18□□□□□ -0.78
IGKV2D-28-202ENST00000558026 C1QL3Q5VWW1 255 aa10.18□□□□□ -0.78
IGKV2D-28-202ENST00000558026 TDRD10Q5VZ19 366 aaKnown RBP10.18□□□□□ -0.78
IGKV2D-28-202ENST00000558026 FAM171BQ6P995 826 aa10.18□□□□□ -0.78
IGKV2D-28-202ENST00000558026 NCEH1Q6PIU2 408 aa10.18□□□□□ -0.78
IGKV2D-28-202ENST00000558026 VSTM1Q6UX27 236 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms