RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 RRP9O43818 475 aaKnown RBP12.96□□□□□ -0.33
SHMT2-233ENST00000557529 RTN3O95197 1032 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-233ENST00000557529 KLRC2P26717 231 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 ADRA1BP35368 520 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 NR2C2P49116 596 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 EIF3EP60228 445 aaKnown RBP12.96□□□□□ -0.33
SHMT2-233ENST00000557529 RPL10AP62906 217 aaKnown RBP12.96□□□□□ -0.33
SHMT2-233ENST00000557529 PITX1P78337 314 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-233ENST00000557529 DEFB103AP81534 67 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 BTG3Q14201 252 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-233ENST00000557529 PSMD5Q16401 504 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 SPDYCQ5MJ68 293 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 KIAA1841Q6NSI8 718 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 TAS1R1Q7RTX1 841 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 MON1AQ86VX9 555 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 SLC39A11Q8N1S5 342 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 PQLC3Q8N755 202 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 PLD5Q8N7P1 536 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 ATAD1Q8NBU5 361 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 FBXO25Q8TCJ0 367 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 RSAD2Q8WXG1 361 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 EDEM1Q92611 657 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 TMEM169Q96HH4 297 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 SPATA17Q96L03 361 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 PGLYRP2Q96PD5 576 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 CSPG4P5Q96PW8 444 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 RC3H2Q9HBD1 1191 aaKnown RBP12.96□□□□□ -0.33
SHMT2-233ENST00000557529 PCDH9Q9HC56 1237 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 WDR6Q9NNW5 1121 aaKnown RBP12.96□□□□□ -0.33
SHMT2-233ENST00000557529 PIGVQ9NUD9 493 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 MTMR10Q9NXD2 777 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.96□□□□□ -0.33
SHMT2-233ENST00000557529 IL37Q9NZH6 218 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 COX16Q9P0S2 106 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 FBXW11Q9UKB1 542 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 PATJQ8NI35 1801 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 VWA8A3KMH1 1905 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 CFAP69A5D8W1 941 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 GOLGA6BA6NDN3 693 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 SGK1O00141 431 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 PPFIA2O75334 1257 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 SOD2P04179 222 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 RBP3P10745 1247 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 HAPLN1P10915 354 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-233ENST00000557529 PECAM1P16284 738 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-233ENST00000557529 IVDP26440 423 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 STIP1P31948 543 aaKnown RBP12.95□□□□□ -0.34
SHMT2-233ENST00000557529 CXCR3P49682 368 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 IFRD2Q12894 506 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-233ENST00000557529 PPIGQ13427 754 aaKnown RBP eCLIP12.95□□□□□ -0.345e-8■□□□□ 10.1
SHMT2-233ENST00000557529 TRIP13Q15645 432 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-233ENST00000557529 DDR2Q16832 855 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 MGAT5BQ3V5L5 792 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 HSP90B2PQ58FF3 399 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 CFAP58Q5T655 872 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 SLC8B1Q6J4K2 584 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 PRSS55Q6UWB4 352 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-233ENST00000557529 RSPO2Q6UXX9 243 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-233ENST00000557529 CEP128Q6ZU80 1094 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 TMC3Q7Z5M5 1100 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 FBXO22Q8NEZ5 403 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 DQX1Q8TE96 717 aaKnown RBP12.95□□□□□ -0.34
SHMT2-233ENST00000557529 RIN2Q8WYP3 895 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-233ENST00000557529 HERC2P3Q9BVR0 1158 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 FOXP3Q9BZS1 431 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 MED4Q9NPJ6 270 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 SPG21Q9NZD8 308 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 CWC15Q9P013 229 aaKnown RBP12.95□□□□□ -0.34
SHMT2-233ENST00000557529 SAE1Q9UBE0 346 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-233ENST00000557529 STK39Q9UEW8 545 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 PRKAG2Q9UGJ0 569 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 CDY1Q9Y6F8 540 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 COL4A4P53420 1690 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-233ENST00000557529 KIAA0100Q14667 2235 aaKnown RBP12.95□□□□□ -0.34
SHMT2-233ENST00000557529 COL4A6Q14031 1691 aa12.95□□□□□ -0.34
SHMT2-233ENST00000557529 FAM92AA1XBS5 289 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 IGLV3-25P01717 112 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 ACRP10323 421 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 YWHAQP27348 245 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 PPM1AP35813 382 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 HCAR3P49019 387 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 GLUD2P49448 558 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 PSEN1P49768 467 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 ROR1Q01973 937 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 DHX9Q08211 1270 aaKnown RBP12.94□□□□□ -0.34
SHMT2-233ENST00000557529 XRCC4Q13426 336 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 SLMAPQ14BN4 828 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 BRMS1LQ5PSV4 323 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 FAM117BQ6P1L5 589 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 C1orf228Q6PIY5 440 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 RNF19BQ6ZMZ0 732 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 DENND5BQ6ZUT9 1274 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 BZW1Q7L1Q6 419 aaKnown RBP12.94□□□□□ -0.34
SHMT2-233ENST00000557529 UBE2Q1Q7Z7E8 422 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 SCD5Q86SK9 330 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 TAC4Q86UU9 113 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 COLGALT1Q8NBJ5 622 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 TSEN2Q8NCE0 465 aaKnown RBP12.94□□□□□ -0.34
SHMT2-233ENST00000557529 ADAM32Q8TC27 787 aa12.94□□□□□ -0.34
SHMT2-233ENST00000557529 RNF139Q8WU17 664 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms