RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 MYL4P12829 197 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 CSF2RAP15509 400 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 CREB1P16220 341 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 TPSB2P20231 275 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 PRKCHP24723 683 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 ACADSBP45954 432 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 RABGGTBP53611 331 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 RAD23BP54727 409 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 SH3BGRP55822 239 aaPredicted RBP7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 KCNJ2P63252 427 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 MRPS35P82673 323 aaKnown RBP7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 SP4Q02446 784 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 ZBTB16Q05516 673 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 PDE4CQ08493 712 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 COL9A2Q14055 689 aaPredicted RBP7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 E2F5Q15329 346 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 TPSAB1Q15661 275 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 PTPN20Q4JDL3 420 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 DNAL1Q4LDG9 190 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 CELF3Q5SZQ8 465 aaKnown RBP7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 MORN1Q5T089 497 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 LMBRD2Q68DH5 695 aaPredicted RBP7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 CGB2Q6NT52 195 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 LCLAT1Q6UWP7 414 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 TIFABQ6ZNK6 161 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 SEPT14Q6ZU15 432 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 FAM47EQ6ZV65 393 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 OTOAQ7RTW8 1153 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 TRMT1LQ7Z2T5 733 aaKnown RBP7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 SESTD1Q86VW0 696 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 UNC93AQ86WB7 457 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 GPATCH11Q8N954 259 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 RNF149Q8NC42 400 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 PPFIBP2Q8ND30 876 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 SPATA18Q8TC71 538 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 NSMCE1Q8WV22 266 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 DCAKDQ8WVC6 231 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 SREK1Q8WXA9 508 aaKnown RBP7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 CDKL2Q92772 493 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 ATP2A3Q93084 1043 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 MIEF2Q96C03 454 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 RMDN2Q96LZ7 410 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 C7orf26Q96N11 449 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 RNF157Q96PX1 679 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 BTBD10Q9BSF8 475 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 CCDC28BQ9BUN5 200 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 PPP1R12CQ9BZL4 782 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 WWP1Q9H0M0 922 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 MROH8Q9H579 483 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 MRGBPQ9NV56 204 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 ERAP1Q9NZ08 941 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 CHKBQ9Y259 395 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 TEX264Q9Y6I9 313 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 GBF1Q92538 1859 aa7.55□□□□□ -1.2
MTHFD1-215ENST00000557370 LCTP09848 1927 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 COPEO14579 308 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 XPOTO43592 962 aaKnown RBP7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 SPAG7O75391 227 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 SKIP12755 728 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 ACADSP16219 412 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 KCNA5P22460 613 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 MIPP30301 263 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 FDFT1P37268 417 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 NEK3P51956 506 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 ZNF135P52742 658 aaPredicted RBP7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 BCAR1P56945 870 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 GPX6P59796 221 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 CCNA1P78396 465 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 IRX4P78413 519 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 BASP1P80723 227 aaKnown RBP7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 SP2Q02086 613 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 OGDHQ02218 1023 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 PTK7Q13308 1070 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 LAMC2Q13753 1193 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 KRT81Q14533 505 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 KCNJ11Q14654 390 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 TTLL4Q14679 1199 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 PRKD1Q15139 912 aaPredicted RBP7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 INSCQ1MX18 579 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 DCAF4L1Q3SXM0 396 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 BBS9Q3SYG4 887 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 ATP13A4Q4VNC1 1196 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 RASIP1Q5U651 963 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 PTCRAQ6ISU1 281 aaPredicted RBP7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 DENND1BQ6P3S1 775 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 KYAT3Q6YP21 454 aaKnown RBP7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 OTOP2Q7RTS6 562 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 CLNKQ7Z7G1 428 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 RNF180Q86T96 592 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 VPS52Q8N1B4 723 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 SHCBP1Q8NEM2 672 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 TCP10LQ8TDR4 215 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 MZB1Q8WU39 189 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 ARNTL2Q8WYA1 636 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 STMN2Q93045 179 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 FAF2Q96CS3 445 aa7.54□□□□□ -1.2
MTHFD1-215ENST00000557370 TBC1D31Q96DN5 1066 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms