RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 NPC1O15118 1278 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 IRAK2O43187 625 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 HSF2BPO75031 334 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 F9P00740 461 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 SERPINC1P01008 464 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 TPM3P06753 285 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 IRF1P10914 325 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 CYP11B1P15538 503 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 CDH5P33151 784 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-222ENST00000557356 SOX5P35711 763 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 SCNN1AP37088 669 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 CDK17Q00537 523 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 CSTF1Q05048 431 aaKnown RBP8.2□□□□□ -1.1
PSEN1-222ENST00000557356 MTAPQ13126 283 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 PDCLQ13371 301 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 MPP7Q5T2T1 576 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 ADGRF1Q5T601 910 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 ACBD5Q5T8D3 534 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-222ENST00000557356 SDE2Q6IQ49 451 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 DENND1BQ6P3S1 775 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 TXNDC11Q6PKC3 985 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 Q6ZNB5 142 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 SLC47A2Q86VL8 602 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 ERICH1Q86X53 443 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 BBS7Q8IWZ6 715 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 SPDYE1Q8NFV5 336 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-222ENST00000557356 RIN3Q8TB24 985 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 EDEM1Q92611 657 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 C18orf8Q96DM3 657 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 NUP58Q9BVL2 599 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 ZSCAN32Q9NX65 697 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 MARK1Q9P0L2 795 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 NUDT5Q9UKK9 219 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 SLC8A2Q9UPR5 921 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 TLR6Q9Y2C9 796 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 SIK3Q9Y2K2 1263 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 PAXBP1Q9Y5B6 917 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 FHOD1Q9Y613 1164 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 GREB1Q4ZG55 1949 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 REV3LO60673 3130 aa8.2□□□□□ -1.1
PSEN1-222ENST00000557356 DENND4CQ5VZ89 1909 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 A0A1W2PQC6 194 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 TYW5A2RUC4 315 aaKnown RBP8.19□□□□□ -1.1
PSEN1-222ENST00000557356 CACNG3O60359 315 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 GREM1O60565 184 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 KAT7O95251 611 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 APOEP02649 317 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 SP9P0CG40 484 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 TYRP14679 529 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 CORO1AP31146 461 aaKnown RBP8.19□□□□□ -1.1
PSEN1-222ENST00000557356 OPRD1P41143 372 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 NBL1P41271 181 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 PGFP49763 221 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 TBX4P57082 545 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 SLC6A3Q01959 620 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 MPPE1Q53F39 396 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 GRAMD4Q6IC98 578 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 OR6B2Q6IFH4 312 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 FSTL4Q6MZW2 842 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 DPY19L2P1Q6NXN4 242 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 SND1Q7KZF4 910 aaKnown RBP eCLIP8.19□□□□□ -1.1
PSEN1-222ENST00000557356 SYT13Q7L8C5 426 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 TMEM25Q86YD3 366 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 DENND1CQ8IV53 801 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 DHX40Q8IX18 779 aaKnown RBP8.19□□□□□ -1.1
PSEN1-222ENST00000557356 ZNF397Q8NF99 534 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-222ENST00000557356 UCMAQ8WVF2 138 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 NKD2Q969F2 451 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-222ENST00000557356 CHFRQ96EP1 664 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 TMA16Q96EY4 203 aaKnown RBP8.19□□□□□ -1.1
PSEN1-222ENST00000557356 PPP1R9BQ96SB3 815 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 FUCA2Q9BTY2 467 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 NUCKS1Q9H1E3 243 aaKnown RBP8.19□□□□□ -1.1
PSEN1-222ENST00000557356 GANQ9H2C0 597 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 NLRC4Q9NPP4 1024 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 RTN4Q9NQC3 1192 aaKnown RBP8.19□□□□□ -1.1
PSEN1-222ENST00000557356 PRMT8Q9NR22 394 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-222ENST00000557356 ARHGEF4Q9NR80 690 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.19□□□□□ -1.1
PSEN1-222ENST00000557356 STOML2Q9UJZ1 356 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 AGO1Q9UL18 857 aaKnown RBP8.19□□□□□ -1.1
PSEN1-222ENST00000557356 STAP1Q9ULZ2 295 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 EYSQ5T1H1 3165 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 UNC80Q8N2C7 3258 aa8.19□□□□□ -1.1
PSEN1-222ENST00000557356 E5RJQ4 531 aa8.18□□□□□ -1.1
PSEN1-222ENST00000557356 NEDD8-MDP1E9PL57 170 aa8.18□□□□□ -1.1
PSEN1-222ENST00000557356 MDM4O15151 490 aa8.18□□□□□ -1.1
PSEN1-222ENST00000557356 PAPSS1O43252 624 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-222ENST00000557356 TULP3O75386 442 aa8.18□□□□□ -1.1
PSEN1-222ENST00000557356 GABBR2O75899 941 aa8.18□□□□□ -1.1
PSEN1-222ENST00000557356 ALDH1A2O94788 518 aa8.18□□□□□ -1.1
PSEN1-222ENST00000557356 GFPT2O94808 682 aa8.18□□□□□ -1.1
PSEN1-222ENST00000557356 EGFP01133 1207 aa8.18□□□□□ -1.1
PSEN1-222ENST00000557356 KLKB1P03952 638 aa8.18□□□□□ -1.1
PSEN1-222ENST00000557356 HMBSP08397 361 aa8.18□□□□□ -1.1
PSEN1-222ENST00000557356 FERP16591 822 aa8.18□□□□□ -1.1
PSEN1-222ENST00000557356 DESP17661 470 aa8.18□□□□□ -1.1
PSEN1-222ENST00000557356 ABCB4P21439 1286 aa8.18□□□□□ -1.1
PSEN1-222ENST00000557356 CCR1P32246 355 aa8.18□□□□□ -1.1
PSEN1-222ENST00000557356 NOS2P35228 1153 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms