RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 CCDC142Q17RM4 750 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 PEAR1Q5VY43 1037 aaPredicted RBP9.2□□□□□ -0.94
VRK1-206ENST00000557222 SLC23A3Q6PIS1 610 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 RHBDF2Q6PJF5 856 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 EPM2AIP1Q7L775 607 aaPredicted RBP9.2□□□□□ -0.94
VRK1-206ENST00000557222 RABEPKQ7Z6M1 372 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 CBWD2Q8IUF1 395 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 SYT12Q8IV01 421 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 NUP93Q8N1F7 819 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 IL17RCQ8NAC3 791 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 MDGA1Q8NFP4 955 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 CEP76Q8TAP6 659 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 INTS4Q96HW7 963 aaKnown RBP9.2□□□□□ -0.94
VRK1-206ENST00000557222 FNBP1Q96RU3 617 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 NUSAP1Q9BXS6 441 aaKnown RBP9.2□□□□□ -0.94
VRK1-206ENST00000557222 FGFBP2Q9BYJ0 223 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 PHACTR1Q9C0D0 580 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 VRTNQ9H8Y1 702 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 IL37Q9NZH6 218 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 CPQQ9Y646 472 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 UBE4BO95155 1302 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 AKAP13Q12802 2813 aa9.2□□□□□ -0.94
VRK1-206ENST00000557222 A0A087X0B3 334 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 FAM92AA1XBS5 289 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 HOXC11O43248 304 aaPredicted RBP9.19□□□□□ -0.94
VRK1-206ENST00000557222 CST3P01034 146 aaPredicted RBP9.19□□□□□ -0.94
VRK1-206ENST00000557222 ADH5P11766 374 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 HOXB4P17483 251 aaPredicted RBP9.19□□□□□ -0.94
VRK1-206ENST00000557222 TNNI1P19237 187 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 SYT1P21579 422 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 ADH6P28332 368 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 HOXD13P35453 343 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 NASPP49321 788 aaPredicted RBP9.19□□□□□ -0.94
VRK1-206ENST00000557222 DHPSP49366 369 aaPredicted RBP9.19□□□□□ -0.94
VRK1-206ENST00000557222 AP3M2P53677 418 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 TNNC1P63316 161 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 IRX4P78413 519 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 ZNF252P-AS1Q0IIN9 211 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 DPYDQ12882 1025 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 WDR72Q3MJ13 1102 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 MDH1BQ5I0G3 518 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 UNQ6494/PRO21346Q6UXR6 183 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 SLC36A4Q6YBV0 504 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 HS2ST1Q7LGA3 356 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 C12orf56Q8IXR9 622 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 CCDC33Q8N5R6 958 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 XXYLT1Q8NBI6 393 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 TXNDC5Q8NBS9 432 aaKnown RBP9.19□□□□□ -0.94
VRK1-206ENST00000557222 TTC16Q8NEE8 873 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 OR6B3Q8NGW1 331 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 NOC3LQ8WTT2 800 aaKnown RBP9.19□□□□□ -0.94
VRK1-206ENST00000557222 SCG3Q8WXD2 468 aaKnown RBP9.19□□□□□ -0.94
VRK1-206ENST00000557222 SYAP1Q96A49 352 aaPredicted RBP9.19□□□□□ -0.94
VRK1-206ENST00000557222 BTBD6Q96KE9 485 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 CGRRF1Q99675 332 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 MRPL45Q9BRJ2 306 aaKnown RBP9.19□□□□□ -0.94
VRK1-206ENST00000557222 TPSD1Q9BZJ3 242 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 TRIM9Q9C026 710 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 SLC32A1Q9H598 525 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 MAGEF1Q9HAY2 307 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 ARHGEF4Q9NR80 690 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 CFAP97Q9P2B7 532 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 STARD13Q9Y3M8 1113 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 ATP8B3O60423 1300 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 PTPRJQ12913 1337 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 SPEGQ15772 3267 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 PLXND1Q9Y4D7 1925 aa9.19□□□□□ -0.94
VRK1-206ENST00000557222 FASNP49327 2511 aaKnown RBP9.19□□□□□ -0.94
VRK1-206ENST00000557222 BAHCC1Q9P281 2608 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 A8MXQ7 604 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 H0Y626 953 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 SGK1O00141 431 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 GIPC1O14908 333 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 AP5Z1O43299 807 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 PPP6R2O75170 966 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 TRIM16O95361 564 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 KLF8O95600 359 aaPredicted RBP9.18□□□□□ -0.94
VRK1-206ENST00000557222 ZDHHC11BP0C7U3 371 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 MBL2P11226 248 aaPredicted RBP9.18□□□□□ -0.94
VRK1-206ENST00000557222 BCKDHBP21953 392 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 AMPD1P23109 780 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 SLC6A11P48066 632 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 CYP24A1Q07973 514 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 TRPC3Q13507 836 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 HNRNPDQ14103 355 aaKnown RBP9.18□□□□□ -0.94
VRK1-206ENST00000557222 DUOXA1Q1HG43 343 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 TRIM61Q5EBN2 209 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 LY6G5CQ5SRR4 150 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 HECTD3Q5T447 861 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 ZNF468Q5VIY5 522 aaPredicted RBP9.18□□□□□ -0.94
VRK1-206ENST00000557222 BTBD8Q5XKL5 378 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 ETFBKMTQ8IXQ9 262 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 ALLCQ8N6M5 410 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 IQUBQ8NA54 791 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 LINC00301Q8NCQ3 95 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 B3GALNT2Q8NCR0 500 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 GOLGA5Q8TBA6 731 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 TMEM174Q8WUU8 243 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 PIGKQ92643 395 aa9.18□□□□□ -0.94
VRK1-206ENST00000557222 FBXO32Q969P5 355 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms