RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 hCG_1818297A0A087WSY0 165 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 SDR42E2A6NKP2 422 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 SMAPO00193 183 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 MEIS2O14770 477 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 MGEA5O60502 916 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ICAM1P05362 532 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 LYNP07948 512 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 TPBGLP0DKB5 382 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ZNF23P17027 643 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 RPL22P35268 128 aaKnown RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ARHGDIAP52565 204 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 HIRAP54198 1017 aaPredicted RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ACTR2P61160 394 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ABCE1P61221 599 aaKnown RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 KCTD2Q14681 263 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ADRM1Q16186 407 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 VWA5B1Q5TIE3 1220 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 TAS2R42Q7RTR8 314 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ZBTB46Q86UZ6 589 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 RTKN2Q8IZC4 609 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 PARP8Q8N3A8 854 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ATPAF2Q8N5M1 289 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 PCDH20Q8N6Y1 951 aaKnown RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ZNF483Q8TF39 744 aaPredicted RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 WDR60Q8WVS4 1066 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ZNF317Q96PQ6 595 aaPredicted RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 MMP19Q99542 508 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 COG4Q9H9E3 785 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 PIDD1Q9HB75 910 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 RSL24D1Q9UHA3 163 aaKnown RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 AK5Q9Y6K8 562 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 PHRF1Q9P1Y6 1649 aaKnown RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 C1orf232A0A0U1RR37 186 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 C2CD2LO14523 706 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 VAPBO95292 243 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 MT-CO1P00395 513 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 RBL1P28749 1068 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 SERPINB10P48595 397 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 C1QBPQ07021 282 aaKnown RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 CLNKQ7Z7G1 428 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 HEATR4Q86WZ0 1026 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 HPS6Q86YV9 775 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 CCDC103Q8IW40 242 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ACTL9Q8TC94 416 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 FAM136AQ96C01 138 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 KREMEN1Q96MU8 473 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 NPAS2Q99743 824 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 BRD8Q9H0E9 1235 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 TCF7L2Q9NQB0 619 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 GIMAP4Q9NUV9 329 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 LGALS13Q9UHV8 139 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 CDH22Q9UJ99 828 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 TDRKHQ9Y2W6 561 aaKnown RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 SNX9Q9Y5X1 595 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 CSADQ9Y600 493 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 MYH7P12883 1935 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 MYH6P13533 1939 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 C15orf38-AP3S2A0A0A6YYH1 394 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 DAB1O75553 588 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ERBB2P04626 1255 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ITGAVP06756 1048 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 MAPTP10636 758 aaKnown RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 VAV1P15498 845 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 KCNK10P57789 538 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ITGADQ13349 1161 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 NR1D2Q14995 579 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 CCDC153Q494R4 210 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 HYIQ5T013 277 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 CHADLQ6NUI6 762 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ARPINQ7Z6K5 226 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 TERB1Q8NA31 727 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 PSPC1Q8WXF1 523 aaKnown RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 EZH1Q92800 747 aaPredicted RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 HPDLQ96IR7 371 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 CPNE1Q99829 537 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 FICDQ9BVA6 458 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ACAD9Q9H845 621 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 BFARQ9NZS9 450 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 ZMYND8Q9ULU4 1186 aaPredicted RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 PLA2G4CQ9UP65 541 aa5.13□□□□□ -1.59
SYNE2-223ENST00000557005 HBS1LQ9Y450 684 aaKnown RBP5.13□□□□□ -1.59
SYNE2-223ENST00000557005 HEATR9A2RTY3 570 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 XPOTO43592 962 aaKnown RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 HUS1O60921 280 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 IL18RAPO95256 599 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 PYGLP06737 847 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 ASNSP08243 561 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 KCNA2P16389 499 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 POLD1P28340 1107 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 TCF7P36402 384 aaPredicted RBP5.12□□□□□ -1.59
SYNE2-223ENST00000557005 TNFSF9P41273 254 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 PSMD7P51665 324 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 NEK3P51956 506 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 RAP1GDS1P52306 607 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 GDF10P55107 478 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 MAPK11Q15759 364 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 GSTA3Q16772 222 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 BMT2Q1RMZ1 405 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 DCAF6Q58WW2 860 aa5.12□□□□□ -1.59
SYNE2-223ENST00000557005 MTX3Q5HYI7 312 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms