RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 MOB2Q70IA6 237 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 INTS8Q75QN2 995 aaKnown RBP4.81□□□□□ -1.64
SRP54-212ENST00000556992 MAEAQ7L5Y9 396 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 PLPPR4Q7Z2D5 763 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 ANKRD23Q86SG2 305 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 KIAA1328Q86T90 577 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 ABRAQ8N0Z2 381 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 DAW1Q8N136 415 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 XXYLT1Q8NBI6 393 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 SMCR8Q8TEV9 937 aaPredicted RBP4.81□□□□□ -1.64
SRP54-212ENST00000556992 HNRNPLLQ8WVV9 542 aaKnown RBP4.81□□□□□ -1.64
SRP54-212ENST00000556992 SLC35C1Q96A29 364 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 ERO1AQ96HE7 468 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 FAM167AQ96KS9 214 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 FIZ1Q96SL8 496 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 CHP1Q99653 195 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 DESI2Q9BSY9 194 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 PAGR1Q9BTK6 254 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 AZI2Q9H6S1 392 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 ZNF408Q9H9D4 720 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 MLXIPQ9HAP2 919 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 CAPN10Q9HC96 672 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 KIAA1586Q9HCI6 787 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 LZTFL1Q9NQ48 299 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 KMT5AQ9NQR1 393 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 ZNF302Q9NR11 478 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 SLC2A4RGQ9NR83 387 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 RIC8BQ9NVN3 520 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 AIPL1Q9NZN9 384 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 TBX20Q9UMR3 447 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 TRAF6Q9Y4K3 522 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 SZT2Q5T011 3432 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 SCN9AQ15858 1988 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 ASTN1O14525 1302 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 GSTTP1A0A1W2PQM5 241 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 DENND3A2RUS2 1198 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 LRRC53A6NM62 1247 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 K7ENM7 598 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 PDHXO00330 501 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 PMM2O15305 246 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 SLC16A4O15374 487 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 N4BP1O75113 896 aaKnown RBP4.8□□□□□ -1.64
SRP54-212ENST00000556992 GFPT2O94808 682 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 NOL4O94818 638 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 HMGCRP04035 888 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 UCHL3P15374 230 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 FERP16591 822 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 PON1P27169 355 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 CNGA1P29973 690 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 GTF2H1P32780 548 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 STAT1P42224 750 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 ARHGAP25P42331 645 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 MAGEA1P43355 309 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 NPTX2P47972 431 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 CYP2J2P51589 502 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 STAT5BP51692 787 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 VAMP7P51809 220 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 EFNA5P52803 228 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 POLGP54098 1239 aaPredicted RBP4.8□□□□□ -1.64
SRP54-212ENST00000556992 INHBCP55103 352 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 PRKCEQ02156 737 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 STRN3Q13033 797 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 ASIC2Q16515 512 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 UGCGQ16739 394 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 ZMAT1Q5H9K5 638 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 ZNF569Q5MCW4 686 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 CELF3Q5SZQ8 465 aaKnown RBP4.8□□□□□ -1.64
SRP54-212ENST00000556992 CCDC122Q5T0U0 273 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 SLFN12LQ6IEE8 588 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 METTL7BQ6UX53 244 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 VPS36Q86VN1 386 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 DHX37Q8IY37 1157 aaKnown RBP4.8□□□□□ -1.64
SRP54-212ENST00000556992 RNF10Q8N5U6 811 aaKnown RBP4.8□□□□□ -1.64
SRP54-212ENST00000556992 AMER2Q8N7J2 671 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 TMEM161BQ8NDZ6 487 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 MNS1Q8NEH6 495 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 OR14K1Q8NGZ2 314 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 MORC4Q8TE76 937 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 AFAP1L1Q8TED9 768 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 SCFD2Q8WU76 684 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 UBXN4Q92575 508 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 CLIP3Q96DZ5 547 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 SPAG5Q96R06 1193 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 MAP7D2Q96T17 732 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 AGAP2Q99490 1192 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 JPH2Q9BR39 696 aaPredicted RBP4.8□□□□□ -1.64
SRP54-212ENST00000556992 CRACR2AQ9BSW2 395 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 LSM14BQ9BX40 385 aaKnown RBP4.8□□□□□ -1.64
SRP54-212ENST00000556992 STK33Q9BYT3 514 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 ATP6V0A4Q9HBG4 840 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 ARHGEF4Q9NR80 690 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 SLC5A4Q9NY91 659 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 ARHGAP28Q9P2N2 729 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 PUF60Q9UHX1 559 aaKnown RBP4.8□□□□□ -1.64
SRP54-212ENST00000556992 REXO2Q9Y3B8 237 aaKnown RBP4.8□□□□□ -1.64
SRP54-212ENST00000556992 PCDHA13Q9Y5I0 950 aa4.8□□□□□ -1.64
SRP54-212ENST00000556992 SSC5DA1L4H1 1573 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 CCL15-CCL14A0A0B4J2E2 113 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 ZNF233A6NK53 670 aa4.79□□□□□ -1.64
SRP54-212ENST00000556992 EFCAB8A8MWE9 144 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms