RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 NAMPTP43490 491 aa12.9□□□□□ -0.34
ABCD4-226ENST00000556971 DGKGP49619 791 aa12.9□□□□□ -0.34
ABCD4-226ENST00000556971 CDH8P55286 799 aa12.9□□□□□ -0.34
ABCD4-226ENST00000556971 ENPP2Q13822 863 aa12.9□□□□□ -0.34
ABCD4-226ENST00000556971 RTN1Q16799 776 aa12.9□□□□□ -0.34
ABCD4-226ENST00000556971 SCN4BQ8IWT1 228 aa12.9□□□□□ -0.34
ABCD4-226ENST00000556971 FBXO39Q8N4B4 442 aa12.9□□□□□ -0.34
ABCD4-226ENST00000556971 ZNF276Q8N554 614 aa12.9□□□□□ -0.34
ABCD4-226ENST00000556971 OR2T3Q8NH03 318 aa12.9□□□□□ -0.34
ABCD4-226ENST00000556971 CCDC12Q8WUD4 166 aaPredicted RBP12.9□□□□□ -0.34
ABCD4-226ENST00000556971 BBS2Q9BXC9 721 aa12.9□□□□□ -0.34
ABCD4-226ENST00000556971 SGK2Q9HBY8 427 aa12.9□□□□□ -0.34
ABCD4-226ENST00000556971 PRDM8Q9NQV8 689 aa12.9□□□□□ -0.34
ABCD4-226ENST00000556971 PCDHB11Q9Y5F2 797 aa12.9□□□□□ -0.34
ABCD4-226ENST00000556971 CXCL8P10145 99 aa12.89□□□□□ -0.35
ABCD4-226ENST00000556971 METTL23Q86XA0 190 aa12.89□□□□□ -0.35
ABCD4-226ENST00000556971 TP53INP2Q8IXH6 220 aa12.89□□□□□ -0.35
ABCD4-226ENST00000556971 TTC13Q8NBP0 860 aa12.89□□□□□ -0.35
ABCD4-226ENST00000556971 BICD2Q8TD16 824 aa12.89□□□□□ -0.35
ABCD4-226ENST00000556971 JPH3Q8WXH2 748 aaPredicted RBP12.89□□□□□ -0.35
ABCD4-226ENST00000556971 BHMTQ93088 406 aa12.89□□□□□ -0.35
ABCD4-226ENST00000556971 SERAC1Q96JX3 654 aa12.89□□□□□ -0.35
ABCD4-226ENST00000556971 ACO2Q99798 780 aaKnown RBP12.89□□□□□ -0.35
ABCD4-226ENST00000556971 CAAP1Q9H8G2 361 aa12.89□□□□□ -0.35
ABCD4-226ENST00000556971 PPM1HQ9ULR3 514 aa12.89□□□□□ -0.35
ABCD4-226ENST00000556971 SH3BP1Q9Y3L3 701 aa12.89□□□□□ -0.35
ABCD4-226ENST00000556971 MN1Q10571 1320 aaPredicted RBP12.88□□□□□ -0.35
ABCD4-226ENST00000556971 PKDREJQ9NTG1 2253 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 ACANP16112 2415 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 ZNF840PA6NDX5 716 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 EFCAB7A8K855 629 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 K7EM74 188 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 SLITRK3O94933 977 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 OAS1P00973 400 aaKnown RBP12.88□□□□□ -0.35
ABCD4-226ENST00000556971 CISD3P0C7P0 127 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 MCF2P10911 925 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 DGKAP23743 735 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 LIFRP42702 1097 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 NLRP5P59047 1200 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 USP46P62068 366 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 ZNF234Q14588 700 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 CDKN3Q16667 212 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 CCDC142Q17RM4 750 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 SMTNL2Q2TAL5 461 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 SLC45A4Q5BKX6 768 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 WSCD1Q658N2 575 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 TPGS1Q6ZTW0 290 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 TAOK1Q7L7X3 1001 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 MCPH1Q8NEM0 835 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 WBP2Q969T9 261 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 C5orf34Q96MH7 638 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 SYNDIG1Q9H7V2 258 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 EPB41L5Q9HCM4 733 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 PISDQ9UG56 409 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 DSEQ9UL01 958 aa12.88□□□□□ -0.35
ABCD4-226ENST00000556971 UBQLN1Q9UMX0 589 aaKnown RBP12.88□□□□□ -0.35
ABCD4-226ENST00000556971 COL6A5A8TX70 2615 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 PRAMEF33A0A0G2JMD5 474 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 CPED1A4D0V7 1026 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 PRAMEF10O60809 474 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 GIMD1P0DJR0 217 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 IRF1P10914 325 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 ADRA1BP35368 520 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 TSPY1Q01534 308 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 NFE2Q16621 373 aaPredicted RBP12.87□□□□□ -0.35
ABCD4-226ENST00000556971 GUSBP11Q6P575 273 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 NCEH1Q6PIU2 408 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 RAB11FIP2Q7L804 512 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 EFL1Q7Z2Z2 1120 aaKnown RBP12.87□□□□□ -0.35
ABCD4-226ENST00000556971 TMPRSS9Q7Z410 1059 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 SPATA3Q8NHX4 192 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 PYM1Q9BRP8 204 aaKnown RBP12.87□□□□□ -0.35
ABCD4-226ENST00000556971 TCHPQ9BT92 498 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 MTA3Q9BTC8 594 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 TARS2Q9BW92 718 aaKnown RBP12.87□□□□□ -0.35
ABCD4-226ENST00000556971 FOXJ2Q9P0K8 574 aa12.87□□□□□ -0.35
ABCD4-226ENST00000556971 PRRC2CQ9Y520 2896 aaKnown RBP12.86□□□□□ -0.35
ABCD4-226ENST00000556971 CYB561D2O14569 222 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 ABLIM1O14639 778 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 NPC1O15118 1278 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 TCEA3O75764 348 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 CYP3A5P20815 502 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 EFNA5P52803 228 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 MYL7Q01449 175 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 SSRP1Q08945 709 aaKnown RBP12.86□□□□□ -0.35
ABCD4-226ENST00000556971 KCNJ12Q14500 433 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 APOA5Q6Q788 366 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 GDF7Q7Z4P5 450 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 DTX1Q86Y01 620 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 LEO1Q8WVC0 666 aaPredicted RBP12.86□□□□□ -0.35
ABCD4-226ENST00000556971 SORCS1Q8WY21 1168 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 EIF2AK1Q9BQI3 630 aaKnown RBP12.86□□□□□ -0.35
ABCD4-226ENST00000556971 ABCB6Q9NP58 842 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 KCNMB3Q9NPA1 279 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 EVA1BQ9NVM1 165 aa12.86□□□□□ -0.35
ABCD4-226ENST00000556971 DAXXQ9UER7 740 aaPredicted RBP12.86□□□□□ -0.35
ABCD4-226ENST00000556971 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.85□□□□□ -0.35
ABCD4-226ENST00000556971 TCP11X1B4DZS4 312 aa12.85□□□□□ -0.35
ABCD4-226ENST00000556971 AGRPO00253 132 aa12.85□□□□□ -0.35
ABCD4-226ENST00000556971 NVLO15381 856 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms