RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 PTPRHQ9HD43 1115 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 ABCB6Q9NP58 842 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 GDF3Q9NR23 364 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 SH3GLB2Q9NR46 395 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-245ENST00000556958 RAD54BQ9Y620 910 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 EML5Q05BV3 1969 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 A0A087X0B3 334 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 KCNJ18B7U540 433 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 SLC37A4O43826 429 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 OPA1O60313 960 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 CSO75390 466 aaKnown RBP6.13□□□□□ -1.43
ATXN3-245ENST00000556958 TADA3O75528 432 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 CYP11B2P19099 503 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 CDC27P30260 824 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 ADD1P35611 737 aaKnown RBP6.13□□□□□ -1.43
ATXN3-245ENST00000556958 CDR1P51861 262 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 DAB2P98082 770 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 CLN3Q13286 438 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 MORC3Q14149 939 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 TBR1Q16650 682 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 SLC10A6Q3KNW5 377 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 PRAMEF14Q5SWL7 426 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 PPP1R26Q5T8A7 1209 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-245ENST00000556958 C20orf194Q5TEA3 1177 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 CDCP2Q5VXM1 449 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 GALNT17Q6IS24 598 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 LRRTM3Q86VH5 581 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 ZC3H18Q86VM9 953 aaKnown RBP6.13□□□□□ -1.43
ATXN3-245ENST00000556958 OXR1Q8N573 874 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 PIGOQ8TEQ8 1089 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 MKRN2Q9H000 416 aaKnown RBP6.13□□□□□ -1.43
ATXN3-245ENST00000556958 IL25Q9H293 177 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 CYLDQ9NQC7 956 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 SPHK2Q9NRA0 654 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 CFAP97Q9P2B7 532 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 WDR35Q9P2L0 1181 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 TUBGCP4Q9UGJ1 667 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 HCN2Q9UL51 889 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 NAP1L2Q9ULW6 460 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-245ENST00000556958 PCDHA4Q9UN74 947 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 PCDHA12Q9UN75 941 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 PCDHGA8Q9Y5G5 932 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 CPQQ9Y646 472 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 STON1Q9Y6Q2 735 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 PTPRBP23467 1997 aa6.13□□□□□ -1.43
ATXN3-245ENST00000556958 CENPEQ02224 2701 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 NBPF19A0A087WUL8 3843 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 KLF18A0A0U1RQI7 1052 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 WASH3PC4AMC7 463 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 MUC22E2RYF6 1773 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-245ENST00000556958 CCER2I3L3R5 266 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 CYB561D2O14569 222 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 CYP26A1O43174 497 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 EFSO43281 561 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 TSPAN3O60637 253 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 FSBPO95073 299 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 EDN1P05305 212 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 CLTAP09496 248 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 EPHA8P29322 1005 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-245ENST00000556958 RXRGP48443 463 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 TRAPPC10P48553 1259 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 GPR15P49685 360 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 ZXDBP98169 803 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 ZNF211Q13398 564 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-245ENST00000556958 SAFBQ15424 915 aaKnown RBP eCLIP6.12□□□□□ -1.43
ATXN3-245ENST00000556958 ZBTB6Q15916 424 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 KYAT1Q16773 422 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 SLC45A4Q5BKX6 768 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 KCNT1Q5JUK3 1230 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 SDHAF4Q5VUM1 108 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 MPZL3Q6UWV2 235 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 FAM124AQ86V42 546 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 BLIDQ8IZY5 108 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 LEO1Q8WVC0 666 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-245ENST00000556958 UCMAQ8WVF2 138 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 BSNDQ8WZ55 320 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 HAS1Q92839 578 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 KIFAP3Q92845 792 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 BIRC7Q96CA5 298 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 CEP295NLQ96MC4 621 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 BTBD1Q9H0C5 482 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 C6orf106Q9H6K1 298 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-245ENST00000556958 ERVMER34-1Q9H9K5 563 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 DNAJC17Q9NVM6 304 aaKnown RBP6.12□□□□□ -1.43
ATXN3-245ENST00000556958 SMPD4Q9NXE4 827 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 PGPEP1Q9NXJ5 209 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 SEPT10Q9P0V9 454 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 VPS54Q9P1Q0 977 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 ORC3Q9UBD5 711 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-245ENST00000556958 TUBD1Q9UJT1 453 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 RCAN3Q9UKA8 241 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 BRPF3Q9ULD4 1205 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 SH3BP1Q9Y3L3 701 aa6.12□□□□□ -1.43
ATXN3-245ENST00000556958 RBM19Q9Y4C8 960 aaKnown RBP6.12□□□□□ -1.43
ATXN3-245ENST00000556958 RBM8AQ9Y5S9 174 aaKnown RBP6.12□□□□□ -1.43
ATXN3-245ENST00000556958 NBASA2RRP1 2371 aa6.11□□□□□ -1.43
ATXN3-245ENST00000556958 CCDC169A6NNP5 214 aa6.11□□□□□ -1.43
ATXN3-245ENST00000556958 CDRT15L2A8MXV6 281 aa6.11□□□□□ -1.43
ATXN3-245ENST00000556958 CCNT1O60563 726 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms