RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 FPR3P25089 353 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 ITPKBP27987 946 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 PLA2G5P39877 138 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 DIO1P49895 249 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 TXNL4AP83876 142 aaKnown RBP4.29□□□□□ -1.72
GPHN-214ENST00000556633 PSG6Q00889 435 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 SF3A3Q12874 501 aaKnown RBP eCLIP4.29□□□□□ -1.72
GPHN-214ENST00000556633 ZNF169Q14929 603 aaPredicted RBP4.29□□□□□ -1.72
GPHN-214ENST00000556633 TBC1D25Q3MII6 688 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 PCID2Q5JVF3 399 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 TTC22Q5TAA0 569 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 DENND2CQ68D51 928 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 LAIR1Q6GTX8 287 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 MTHFD1LQ6UB35 978 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 CYP26C1Q6V0L0 522 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 C2CD5Q86YS7 1000 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 ULK2Q8IYT8 1036 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 PNPLA1Q8N8W4 532 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 SPPL3Q8TCT6 385 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 CSGALNACT1Q8TDX6 532 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 HMGB4Q8WW32 186 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 THAP4Q8WY91 577 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 SLC9A6Q92581 669 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 PRR11Q96HE9 360 aaPredicted RBP4.29□□□□□ -1.72
GPHN-214ENST00000556633 PDLIM2Q96JY6 352 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 UBXN10Q96LJ8 280 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 PAAF1Q9BRP4 392 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 FSD1LQ9BXM9 530 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 CCDC134Q9H6E4 229 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 FBXO28Q9NVF7 368 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 FOXJ2Q9P0K8 574 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 FEM1BQ9UK73 627 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 PCDHB2Q9Y5E7 798 aa4.29□□□□□ -1.72
GPHN-214ENST00000556633 TMEM191CA6NGB0 347 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 EFCAB8A8MWE9 144 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 B9A039 149 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 M0QZQ0 153 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 KRT38O76015 456 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 PDE8BO95263 885 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 LARGE1O95461 756 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 FAM163BP0C2L3 166 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 MYCLP12524 364 aaPredicted RBP4.28□□□□□ -1.72
GPHN-214ENST00000556633 TACR2P21452 398 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 MMP8P22894 467 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 THBS4P35443 961 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 BUD31P41223 144 aaPredicted RBP4.28□□□□□ -1.72
GPHN-214ENST00000556633 AARSP49588 968 aaKnown RBP eCLIP4.28□□□□□ -1.72
GPHN-214ENST00000556633 SIM1P81133 766 aaPredicted RBP4.28□□□□□ -1.72
GPHN-214ENST00000556633 LMAN2Q12907 356 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 TAF12Q16514 161 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 ZXDCQ2QGD7 858 aaPredicted RBP4.28□□□□□ -1.72
GPHN-214ENST00000556633 GALNTL6Q49A17 601 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 ALFQ53S48 1182 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 AARS2Q5JTZ9 985 aaKnown RBP4.28□□□□□ -1.72
GPHN-214ENST00000556633 FBXO47Q5MNV8 452 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 ANKRD40Q6AI12 368 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 KIRREL2Q6UWL6 708 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 Q6ZPA2 131 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 SFTPA1Q8IWL2 248 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 OR6Y1Q8NGX8 325 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 AFG1LQ8WV93 481 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 CPT1BQ92523 772 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 GOLGA1Q92805 767 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 REXO5Q96IC2 774 aaKnown RBP4.28□□□□□ -1.72
GPHN-214ENST00000556633 MECRQ9BV79 373 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 CINPQ9BW66 212 aaPredicted RBP4.28□□□□□ -1.72
GPHN-214ENST00000556633 TOR3AQ9H497 397 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 SAP30LQ9HAJ7 183 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 USP29Q9HBJ7 922 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 NDUFAF4Q9P032 175 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 ZBTB1Q9Y2K1 713 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 UBE2J1Q9Y385 318 aaPredicted RBP4.28□□□□□ -1.72
GPHN-214ENST00000556633 HS3ST3A1Q9Y663 406 aa4.28□□□□□ -1.72
GPHN-214ENST00000556633 ARHGEF17Q96PE2 2063 aaPredicted RBP4.28□□□□□ -1.72
GPHN-214ENST00000556633 CCDC187A0A096LP49 1063 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 LOC105369274A0A096LPK9 316 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 LOC102723532A0A0G2JNH3 316 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 SLC38A8A6NNN8 435 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 E7EVH7 732 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 GCOM1H8Y6P7 765 aaPredicted RBP4.27□□□□□ -1.73
GPHN-214ENST00000556633 M0QYT0 321 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 NCAM2O15394 837 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 SUV39H1O43463 412 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 PRAMEF2O60811 474 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 TMIGD3P0DMS9 266 aaPredicted RBP4.27□□□□□ -1.73
GPHN-214ENST00000556633 C6P13671 934 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 KRT4P19013 534 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 DRD4P21917 467 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 SERPINA4P29622 427 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 IGHMBP2P38935 993 aaKnown RBP4.27□□□□□ -1.73
GPHN-214ENST00000556633 PAPOLAP51003 745 aaKnown RBP4.27□□□□□ -1.73
GPHN-214ENST00000556633 RNASELQ05823 741 aaKnown RBP4.27□□□□□ -1.73
GPHN-214ENST00000556633 DNASE1L3Q13609 305 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 CBFBQ13951 182 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 AAK1Q2M2I8 961 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 FAM153CQ494X1 144 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 RNASE12Q5GAN4 147 aaKnown RBP4.27□□□□□ -1.73
GPHN-214ENST00000556633 ZNF569Q5MCW4 686 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 TSTD2Q5T7W7 516 aa4.27□□□□□ -1.73
GPHN-214ENST00000556633 NAPRTQ6XQN6 538 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms