RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 PPM1KQ8N3J5 372 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 DEFB119Q8N690 84 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 FRMD1Q8N878 549 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 SPATA20Q8TB22 786 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 KCNV2Q8TDN2 545 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 DDI1Q8WTU0 396 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 RNF139Q8WU17 664 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 NELFBQ8WX92 580 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 NDRG1Q92597 394 aaKnown RBP11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 SLC35C1Q96A29 364 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 CEP63Q96MT8 703 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 NT5C1BQ96P26 610 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 UBXN6Q9BZV1 441 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 FAM124BQ9H5Z6 455 aaPredicted RBP11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 MARCH2Q9P0N8 246 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 CTNND2Q9UQB3 1225 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 COQ4Q9Y3A0 265 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 MYO18AQ92614 2054 aaKnown RBP11.08□□□□□ -0.63
SPTLC2-205ENST00000556607 PRRT4C9JH25 899 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 TULP2O00295 520 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 PIK3R2O00459 728 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 XPO1O14980 1071 aaKnown RBP11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 AP5Z1O43299 807 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 RGS7P49802 495 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 STX17P56962 302 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 RPL6Q02878 288 aaKnown RBP11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 ARID5AQ03989 594 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 ADIGQ0VDE8 80 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 Q6ZNB5 142 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 ZC3H3Q8IXZ2 948 aaKnown RBP11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 UCMAQ8WVF2 138 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 EDEM1Q92611 657 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 ACOX2Q99424 681 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 NUSAP1Q9BXS6 441 aaKnown RBP11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 OLA1Q9NTK5 396 aaKnown RBP11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 MARK1Q9P0L2 795 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 SFMBT1Q9UHJ3 866 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 AGO1Q9UL18 857 aaKnown RBP11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 RAD54BQ9Y620 910 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 EP300Q09472 2414 aaPredicted RBP11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 ABCA7Q8IZY2 2146 aa11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 ATXN2Q99700 1313 aaKnown RBP11.08□□□□□ -0.64
SPTLC2-205ENST00000556607 C4orf47A7E2U8 309 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 PATE3B3GLJ2 98 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 WASH3PC4AMC7 463 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 M0QYV0 167 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 NDUFS2O75306 463 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 KLKB1P03952 638 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 ADRB1P08588 477 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 GABRG2P18507 467 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 HARS2P49590 506 aaKnown RBP11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 LIMK1P53667 647 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 MCCD1P59942 119 aaPredicted RBP11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 UAP1L1Q3KQV9 507 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 RAB41Q5JT25 222 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 DAB2IPQ5VWQ8 1189 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 LYSMD4Q5XG99 296 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 KIAA1324Q6UXG2 1013 aaKnown RBP11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 SLC36A4Q6YBV0 504 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 RRAGAQ7L523 313 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 FMNL3Q8IVF7 1028 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 ZNF276Q8N554 614 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 OLIG1Q8TAK6 271 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 IPO4Q8TEX9 1081 aaKnown RBP11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 GOLGA1Q92805 767 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 PLD4Q96BZ4 506 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 CACNA2D2Q9NY47 1150 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 CALCOCO1Q9P1Z2 691 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 KIAA1257Q9ULG3 409 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 STARD13Q9Y3M8 1113 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 ADAMTS9Q9P2N4 1935 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 PLXND1Q9Y4D7 1925 aa11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 TNRC6BQ9UPQ9 1833 aaKnown RBP11.07□□□□□ -0.64
SPTLC2-205ENST00000556607 TSPAN3O60637 253 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 GADD45BO75293 160 aaPredicted RBP11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 ZNF217O75362 1048 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 CFIP05156 583 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 PAEPP09466 180 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 CISD3P0C7P0 127 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 SETSIPP0DME0 302 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 BRD2P25440 801 aaKnown RBP11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 PTGER3P43115 390 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 ATXN3P54252 364 aaPredicted RBP11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 IRX4P78413 519 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 KCNH2Q12809 1159 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 PAK1Q13153 545 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 STARD3Q14849 445 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 TRIM61Q5EBN2 209 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 FYB2Q5VWT5 728 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 BSPRYQ5W0U4 402 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 PM20D1Q6GTS8 502 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 KIAA1211LQ6NV74 962 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 ELOA2Q8IYF1 753 aaPredicted RBP11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 RGL4Q8IZJ4 473 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 RBBP8NLQ8NC74 664 aaPredicted RBP11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 CNTNAP3BQ96NU0 1288 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 SRRTQ9BXP5 876 aaKnown RBP11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 CNTNAP3Q9BZ76 1288 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 CIPCQ9C0C6 399 aa11.06□□□□□ -0.64
SPTLC2-205ENST00000556607 TMEM9BQ9NQ34 198 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms