RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 CCDC38Q502W7 563 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 ICE2Q659A1 982 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 ANKMY2Q8IV38 441 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 COLGALT2Q8IYK4 626 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 ZBED8Q8IZ13 594 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 STKLD1Q8NE28 680 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 NT5C3BQ969T7 300 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 FAF2Q96CS3 445 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 PKMYT1Q99640 499 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 CTNNAL1Q9UBT7 734 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 FARP1Q9Y4F1 1045 aaPredicted RBP19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 FOXO6A8MYZ6 492 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 LTFP02788 710 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 TSPY1Q01534 308 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 TCTN1Q2MV58 587 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 PPIL6Q8IXY8 311 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 SCLYQ96I15 445 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 USP29Q9HBJ7 922 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 CSNK1G1Q9HCP0 422 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 ANLNQ9NQW6 1124 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 ENPP3O14638 875 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 INPPL1O15357 1258 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 AMHP03971 560 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 DSC1Q08554 894 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 PDIA2Q13087 525 aaKnown RBP19■□□□□ 0.63
SDR39U1-220ENST00000556548 FNBP1LQ5T0N5 605 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 C6orf118Q5T5N4 469 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 FAXCQ5TGI0 409 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 BHLHA9Q7RTU4 235 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 CEP57Q86XR8 500 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 CCDC13Q8IYE1 715 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 TLCD1Q96CP7 247 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 B3GALT6Q96L58 329 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 SHOX2O60902 331 aaPredicted RBP19■□□□□ 0.63
SDR39U1-220ENST00000556548 TMEM63AO94886 807 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 STIP1P31948 543 aaKnown RBP19■□□□□ 0.63
SDR39U1-220ENST00000556548 ACTN2P35609 894 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 ARL4AP40617 200 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 AUHQ13825 339 aaKnown RBP19■□□□□ 0.63
SDR39U1-220ENST00000556548 SLC39A12Q504Y0 691 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 LRRC31Q6UY01 552 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 LEKR1Q6ZMV7 388 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 SPATA2LQ8IUW3 424 aaPredicted RBP19■□□□□ 0.63
SDR39U1-220ENST00000556548 C10orf67Q8IYJ2 551 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 ABI1Q8IZP0 508 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 NAT8LQ8N9F0 302 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 DMAP1Q9NPF5 467 aaPredicted RBP19■□□□□ 0.63
SDR39U1-220ENST00000556548 DDIT4Q9NX09 232 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 PCDHB8Q9UN66 801 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 SHOC2Q9UQ13 582 aa19■□□□□ 0.63
SDR39U1-220ENST00000556548 DNM1LO00429 736 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 TADA2AO75478 443 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 GRIK1P39086 918 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 PRMT2P55345 433 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 PPP2R2AP63151 447 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 BFSP2Q13515 415 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 MSS51Q4VC12 460 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 NCBP2-AS2Q69YL0 99 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 PCGF5Q86SE9 256 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 MDM1Q8TC05 714 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 FTHL17Q9BXU8 183 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 XPO7Q9UIA9 1087 aaKnown RBP18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 PCDHB7Q9Y5E2 793 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 TSC2P49815 1807 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 FAM72CH0Y354 149 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 CCL23P55773 120 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 HIF1AQ16665 826 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 ZSCAN26Q16670 478 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 FAM72AQ5TYM5 149 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 FAM72DQ6L9T8 149 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 BNIPLQ7Z465 357 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 FAM72BQ86X60 149 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 SCN4BQ8IWT1 228 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 CCDC110Q8TBZ0 833 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 PGM2Q96G03 612 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 RNF208Q9H0X6 261 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 TMEM161AQ9NX61 479 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 ABI2Q9NYB9 513 aaPredicted RBP18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 TBK1Q9UHD2 729 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 USP3Q9Y6I4 520 aa18.99■□□□□ 0.63
SDR39U1-220ENST00000556548 FRMPD3Q5JV73 1810 aa18.98■□□□□ 0.63
SDR39U1-220ENST00000556548 I6L893 689 aaPredicted RBP18.98■□□□□ 0.63
SDR39U1-220ENST00000556548 PBX3P40426 434 aa18.98■□□□□ 0.63
SDR39U1-220ENST00000556548 SDHAF4Q5VUM1 108 aa18.98■□□□□ 0.63
SDR39U1-220ENST00000556548 BSPRYQ5W0U4 402 aa18.98■□□□□ 0.63
SDR39U1-220ENST00000556548 CENPUQ71F23 418 aa18.98■□□□□ 0.63
SDR39U1-220ENST00000556548 RNF139Q8WU17 664 aa18.98■□□□□ 0.63
SDR39U1-220ENST00000556548 RAB6BQ9NRW1 208 aa18.98■□□□□ 0.63
SDR39U1-220ENST00000556548 DTLQ9NZJ0 730 aa18.98■□□□□ 0.63
SDR39U1-220ENST00000556548 SNX10Q9Y5X0 201 aa18.98■□□□□ 0.63
SDR39U1-220ENST00000556548 TYMPP19971 482 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 PSEN1P49768 467 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 PLEKHG4Q58EX7 1191 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 EFHC2Q5JST6 749 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 KCNT2Q6UVM3 1135 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 VSIG1Q86XK7 387 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 PGLYRP2Q96PD5 576 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 SELENOSQ9BQE4 189 aa18.97■□□□□ 0.63
SDR39U1-220ENST00000556548 TMEM109Q9BVC6 243 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms