RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 H0YIN7 160 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 EIF3FO00303 357 aaPredicted RBP5.61□□□□□ -1.51
SRP54-211ENST00000556445 NRP2O60462 931 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 RANBP6O60518 1105 aaKnown RBP5.61□□□□□ -1.51
SRP54-211ENST00000556445 FZD7O75084 574 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 STC2O76061 302 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 COL4A1P02462 1669 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 MMP10P09238 476 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 XRCC6P12956 609 aaKnown RBP eCLIP5.61□□□□□ -1.51
SRP54-211ENST00000556445 TNFSF4P23510 183 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 KLRK1P26718 216 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 PEX2P28328 305 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 PIK3CBP42338 1070 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 GPR3P46089 330 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 GNAQP50148 359 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 CASP5P51878 434 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 FKBP1AP62942 108 aaKnown RBP5.61□□□□□ -1.51
SRP54-211ENST00000556445 DYNLL1P63167 89 aaKnown RBP5.61□□□□□ -1.51
SRP54-211ENST00000556445 CCDC173Q0VFZ6 552 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 ELAVL1Q15717 326 aaKnown RBP5.61□□□□□ -1.51
SRP54-211ENST00000556445 SLC15A2Q16348 729 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 MFSD14BQ5SR56 506 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 IZUMO3Q5VZ72 239 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 CCDC62Q6P9F0 684 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 CCDC73Q6ZRK6 1079 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 ADGRA1Q86SQ6 560 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 MICU3Q86XE3 530 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 TMPRSS6Q8IU80 811 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 CMIPQ8IY22 773 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 FANCBQ8NB91 859 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 PCYOX1LQ8NBM8 494 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 CTCFLQ8NI51 663 aaPredicted RBP5.61□□□□□ -1.51
SRP54-211ENST00000556445 TBC1D16Q8TBP0 767 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 BICD2Q8TD16 824 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 AFAP1L1Q8TED9 768 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 SDR42E1Q8WUS8 393 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 RSAD2Q8WXG1 361 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 ATP6V1E2Q96A05 226 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 ARL8AQ96BM9 186 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 ZNF512Q96ME7 567 aaPredicted RBP5.61□□□□□ -1.51
SRP54-211ENST00000556445 ROBO3Q96MS0 1386 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 MRIQ9BWK5 157 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 CERS4Q9HA82 394 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 TNS1Q9HBL0 1735 aaKnown RBP5.61□□□□□ -1.51
SRP54-211ENST00000556445 UBN1Q9NPG3 1134 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 ITM2CQ9NQX7 267 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 MRGBPQ9NV56 204 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 AURKAIP1Q9NWT8 199 aaPredicted RBP5.61□□□□□ -1.51
SRP54-211ENST00000556445 MCM9Q9NXL9 1143 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 AATFQ9NY61 560 aaKnown RBP eCLIP5.61□□□□□ -1.51
SRP54-211ENST00000556445 GGA3Q9NZ52 723 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 NCDNQ9UBB6 729 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 MYH2Q9UKX2 1941 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 L1RE1Q9UN81 338 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.61□□□□□ -1.51
SRP54-211ENST00000556445 SNX5Q9Y5X3 404 aa5.61□□□□□ -1.51
SRP54-211ENST00000556445 BAZ2AQ9UIF9 1905 aaKnown RBP5.6□□□□□ -1.51
SRP54-211ENST00000556445 ANKRD31Q8N7Z5 1873 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 DLEC1Q9Y238 1755 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 GAKO14976 1311 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 SYCE3A1L190 88 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 TSPY2A6NKD2 308 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 NPIPB8E9PQR5 432 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 H3BML4 177 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 FRS3O43559 492 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 NCK2O43639 380 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 BMP15O95972 392 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 CSTBP04080 98 aaKnown RBP5.6□□□□□ -1.51
SRP54-211ENST00000556445 CCDC192P0DO97 292 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 FDPSP14324 419 aaKnown RBP5.6□□□□□ -1.51
SRP54-211ENST00000556445 VEGFAP15692 232 aaPredicted RBP5.6□□□□□ -1.51
SRP54-211ENST00000556445 CTNNA1P35221 906 aaKnown RBP5.6□□□□□ -1.51
SRP54-211ENST00000556445 KRT9P35527 623 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 RABGGTBP53611 331 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 NPEPPSP55786 919 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 MGAT5Q09328 741 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 ACAP2Q15057 778 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 STK38Q15208 465 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 ANO4Q32M45 955 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 C12orf60Q5U649 245 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 RNF220Q5VTB9 566 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 C1QL3Q5VWW1 255 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 PLBD1Q6P4A8 553 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 HTR3DQ70Z44 454 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 TAS1R1Q7RTX1 841 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 TMTC1Q8IUR5 882 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 ELOA2Q8IYF1 753 aaPredicted RBP5.6□□□□□ -1.51
SRP54-211ENST00000556445 GRAMD1CQ8IYS0 662 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 ZNF444Q8N0Y2 327 aaPredicted RBP5.6□□□□□ -1.51
SRP54-211ENST00000556445 JADE3Q92613 823 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 ANKS1AQ92625 1134 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 TRIM44Q96DX7 344 aaPredicted RBP5.6□□□□□ -1.51
SRP54-211ENST00000556445 CCDC34Q96HJ3 373 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 LZTS2Q9BRK4 669 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 TMEM120AQ9BXJ8 343 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 ZNF341Q9BYN7 854 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 XPO4Q9C0E2 1151 aaKnown RBP5.6□□□□□ -1.51
SRP54-211ENST00000556445 NUP62CLQ9H1M0 184 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 VPS33BQ9H267 617 aa5.6□□□□□ -1.51
SRP54-211ENST00000556445 FOXP1Q9H334 677 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms