RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 XKR9Q5GH70 373 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 SLC8B1Q6J4K2 584 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 MOXD1Q6UVY6 613 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 SPATC1Q76KD6 591 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 RALGPS2Q86X27 583 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-239ENST00000556315 TCEAL8Q8IYN2 117 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 ELMOD1Q8N336 334 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 CAMKK1Q8N5S9 505 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 ETNPPLQ8TBG4 499 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 TBCKQ8TEA7 893 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 HASPINQ8TF76 798 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 TCEAL4Q96EI5 215 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 MAP6Q96JE9 813 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 MRGPRX3Q96LB0 322 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 FAM20AQ96MK3 541 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 ZSWIM3Q96MP5 696 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 DNAJC7Q99615 494 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 SCNM1Q9BWG6 230 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 SPATA9Q9BWV2 254 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 FOXP3Q9BZS1 431 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 ZCCHC4Q9H5U6 513 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 SH3GLB2Q9NR46 395 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 CACNG4Q9UBN1 327 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 PFDN2Q9UHV9 154 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 MBD1Q9UIS9 605 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-239ENST00000556315 NAP1L2Q9ULW6 460 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-239ENST00000556315 MAFFQ9ULX9 164 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 FAM208BQ5VWN6 2430 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 USP24Q9UPU5 2620 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 FANCMQ8IYD8 2048 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 WDR87Q6ZQQ6 2873 aa5.3□□□□□ -1.56
ATXN3-239ENST00000556315 LOXHD1Q8IVV2 1947 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 PKD1L2Q7Z442 2459 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 A0A1W2PQU0 124 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 TMEM82A0PJX8 343 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 SPECC1L-ADORA2AF8WAN1 911 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 H7C4K7 107 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 PTGESO14684 152 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 B4GALT5O43286 388 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 EXTL3O43909 919 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 MOSPD3O75425 235 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 TDP2O95551 362 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 CAVIN2O95810 425 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 CD3EP07766 207 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 HMGB1P09429 215 aaKnown RBP5.29□□□□□ -1.56
ATXN3-239ENST00000556315 RPL10P27635 214 aaKnown RBP5.29□□□□□ -1.56
ATXN3-239ENST00000556315 CCR2P41597 374 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 EPHA5P54756 1037 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 NLRP5P59047 1200 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 PPP2R2AP63151 447 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 ROR1Q01973 937 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 FCHO2Q0JRZ9 810 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 PTPAQ15257 358 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 NAB2Q15742 525 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 LONRF2Q1L5Z9 754 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 PLK5Q496M5 336 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 SOWAHCQ53LP3 525 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-239ENST00000556315 ZC3H12BQ5HYM0 836 aaKnown RBP5.29□□□□□ -1.56
ATXN3-239ENST00000556315 ADGRF1Q5T601 910 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 TPGS2Q68CL5 300 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 GTF2IRD2BQ6EKJ0 949 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 Q6ZS52 159 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 HAUS6Q7Z4H7 955 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 GTF2IRD2Q86UP8 949 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 CDR2LQ86X02 465 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-239ENST00000556315 TMEM151BQ8IW70 566 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 ZCCHC14Q8WYQ9 949 aaKnown RBP5.29□□□□□ -1.56
ATXN3-239ENST00000556315 CCDC140Q96MF4 163 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 UROC1Q96N76 676 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 AARSD1Q9BTE6 412 aaKnown RBP5.29□□□□□ -1.56
ATXN3-239ENST00000556315 EDEM2Q9BV94 578 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 SMOC1Q9H4F8 434 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 CYP4F11Q9HBI6 524 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 XPNPEP1Q9NQW7 623 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 C2orf42Q9NWW7 574 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 WRAP73Q9P2S5 460 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-239ENST00000556315 DDX25Q9UHL0 483 aaKnown RBP5.29□□□□□ -1.56
ATXN3-239ENST00000556315 SLC8A2Q9UPR5 921 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 NEUROG3Q9Y4Z2 214 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 LAMA4Q16363 1823 aa5.29□□□□□ -1.56
ATXN3-239ENST00000556315 FRYLO94915 3013 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 TRAV20A0A0B4J274 112 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 BCLAF3A2AJT9 711 aaKnown RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 SLC38A8A6NNN8 435 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 AURKAO14965 403 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 SYN3O14994 580 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 N4BP3O15049 544 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 MARCH6O60337 910 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 TRIM13O60858 407 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 SLITRK3O94933 977 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 SEC24AO95486 1093 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 TOP3BO95985 862 aaKnown RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 MYL4P12829 197 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 XRCC6P12956 609 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 GLRA2P23416 452 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 IGFBP6P24592 240 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 TKTP29401 623 aaKnown RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 HOXC12P31275 282 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 HOXC13P31276 330 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 RDXP35241 583 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms