RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 LCMT1Q9UIC8 334 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 AGAP1Q9UPQ3 857 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 USP15Q9Y4E8 981 aaPredicted RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 NEUROG3Q9Y4Z2 214 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 CEP83Q9Y592 693 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 HCFC2Q9Y5Z7 792 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 FAM221BA6H8Z2 402 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 TMEM110-MUSTN1A8MSY1 372 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 H3BNC9 293 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 CCDC188H7C350 402 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 PDE2AO00408 941 aaPredicted RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 CAPN9O14815 690 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 TOP3BO95985 862 aaKnown RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 CALB1P05937 261 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 WEE2P0C1S8 567 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 LINC00271P0C7V0 271 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 ZSCAN20P17040 1043 aaPredicted RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 IBSPP21815 317 aaPredicted RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 FGFR4P22455 802 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 POLR2BP30876 1174 aaKnown RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 HOXA11P31270 313 aaPredicted RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 HOXC8P31273 242 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 ASPAP45381 313 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 ZNF132P52740 706 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 LIMK1P53667 647 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 MRPS6P82932 125 aaKnown RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 C2orf54Q08AI8 447 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 HYAL1Q12794 435 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 POU4F2Q12837 409 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 MESDQ14696 234 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 PPP2R5EQ16537 467 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 MAP9Q49MG5 647 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 FAM47CQ5HY64 1035 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 RNF187Q5TA31 235 aaPredicted RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 NAA35Q5VZE5 725 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 PSAPL1Q6NUJ1 521 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 WDR93Q6P2C0 686 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 PRR23CQ6ZRP0 262 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 ANKS3Q6ZW76 656 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 PHF13Q86YI8 300 aaPredicted RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 HACE1Q8IYU2 909 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 NOA1Q8NC60 698 aaKnown RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 ZNF564Q8TBZ8 553 aaPredicted RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 ACTRT1Q8TDG2 376 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 ZNF606Q8WXB4 792 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 CPA5Q8WXQ8 436 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 CYFIP2Q96F07 1278 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 EAF1Q96JC9 268 aaPredicted RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 NT5C1AQ9BXI3 368 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 TRIM55Q9BYV6 548 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 ANKZF1Q9H8Y5 726 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 SNTG2Q9NY99 539 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 ADAM22Q9P0K1 906 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 GTF2IRD1Q9UHL9 959 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 SIX4Q9UIU6 781 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 RAB21Q9UL25 225 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 KIAA1257Q9ULG3 409 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 UBQLN1Q9UMX0 589 aaKnown RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 PACSIN2Q9UNF0 486 aaPredicted RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 PIN4Q9Y237 131 aaKnown RBP7.18□□□□□ -1.26
SLIRP-204ENST00000555890 PCDHGA2Q9Y5H1 932 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 TRPV2Q9Y5S1 764 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 ALG6Q9Y672 507 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 SCINQ9Y6U3 715 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 NBEAL1Q6ZS30 2694 aa7.18□□□□□ -1.26
SLIRP-204ENST00000555890 A0A1W2PNR3 127 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 TTC24A2A3L6 582 aaPredicted RBP7.17□□□□□ -1.26
SLIRP-204ENST00000555890 CCDC66A2RUB6 948 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 J3QL48 77 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 MYO1FO00160 1098 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 PGRMC1O00264 195 aaKnown RBP7.17□□□□□ -1.26
SLIRP-204ENST00000555890 ENPP3O14638 875 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 LINC01565O15544 149 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 SPOPO43791 374 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 RRP9O43818 475 aaKnown RBP7.17□□□□□ -1.26
SLIRP-204ENST00000555890 UPP2O95045 317 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 CALCAP01258 141 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 CD19P15391 556 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 CTNNA2P26232 953 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 MSX1P28360 303 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 SLC1A1P43005 524 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 CTSOP43234 321 aaPredicted RBP7.17□□□□□ -1.26
SLIRP-204ENST00000555890 NDUFV1P49821 464 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 NOMO3P69849 1222 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 PTPN11Q06124 597 aaPredicted RBP7.17□□□□□ -1.26
SLIRP-204ENST00000555890 MBTPS1Q14703 1052 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 ZNF528Q3MIS6 628 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 C8orf74Q6P047 294 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 SCARA5Q6ZMJ2 495 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.17□□□□□ -1.26
SLIRP-204ENST00000555890 SESTD1Q86VW0 696 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 ERICH1Q86X53 443 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 PASD1Q8IV76 773 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 RASGEF1CQ8N431 466 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 LRRC52Q8N7C0 313 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 MS4A14Q96JA4 679 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 C11orf70Q9BRQ4 267 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 PLVAPQ9BX97 442 aa7.17□□□□□ -1.26
SLIRP-204ENST00000555890 EIF2AQ9BY44 585 aaKnown RBP7.17□□□□□ -1.26
SLIRP-204ENST00000555890 OXCT2Q9BYC2 517 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms