RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 TANGO2Q6ICL3 276 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 ZNF571Q7Z3V5 609 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-213ENST00000555386 RNF135Q8IUD6 432 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 ARID3BQ8IVW6 561 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-213ENST00000555386 SCUBE3Q8IX30 993 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 COG1Q8WTW3 980 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 CPA5Q8WXQ8 436 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 FGF14Q92915 247 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 CALR3Q96L12 384 aaKnown RBP10.32□□□□□ -0.76
PSEN1-213ENST00000555386 TTLL2Q9BWV7 592 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 SMOC2Q9H3U7 446 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 TASP1Q9H6P5 420 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 NMUR1Q9HB89 426 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 TLR8Q9NR97 1041 aaKnown RBP10.32□□□□□ -0.76
PSEN1-213ENST00000555386 SMPD4Q9NXE4 827 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 GDE1Q9NZC3 331 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 SCML2Q9UQR0 700 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 USTQ9Y2C2 406 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 NUMBLQ9Y6R0 609 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 TRAV19A0A0A6YYK7 116 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 TMCO5BA8MYB1 307 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 E5RJQ4 531 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 BUB1O43683 1085 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 PALMO75781 387 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 GABBR2O75899 941 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 ZBED1O96006 694 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 IRF1P10914 325 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 MBL2P11226 248 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-213ENST00000555386 RARGP13631 454 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 CHRNB2P17787 502 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 HDCP19113 662 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 C2orf54Q08AI8 447 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 PDCLQ13371 301 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 C10orf120Q5SQS8 335 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 HECTD3Q5T447 861 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 ALKBH5Q6P6C2 394 aaKnown RBP10.31□□□□□ -0.76
PSEN1-213ENST00000555386 MON1AQ86VX9 555 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 CMTM8Q8IZV2 173 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 PIP4P2Q8N4L2 257 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 WDTC1Q8N5D0 677 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 TMEM35BQ8NCS4 154 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 PDZD8Q8NEN9 1154 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 SLC30A5Q8TAD4 765 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 DDX1Q92499 740 aaKnown RBP10.31□□□□□ -0.76
PSEN1-213ENST00000555386 EDEM1Q92611 657 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 SMARCD2Q92925 531 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 FAM149B1Q96BN6 582 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 CEP295NLQ96MC4 621 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 ASB16Q96NS5 453 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 CPXM1Q96SM3 734 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 AGPAT1Q99943 283 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 PLA2G2FQ9BZM2 168 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 KCNK12Q9HB15 430 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 ZFP14Q9HCL3 533 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 PNPLA8Q9NP80 782 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 OSER1Q9NX31 292 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-213ENST00000555386 EPS15L1Q9UBC2 864 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 MUTYHQ9UIF7 546 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 NOCTQ9UK39 431 aaKnown RBP10.31□□□□□ -0.76
PSEN1-213ENST00000555386 PCDHGC3Q9UN70 934 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 CCL26Q9Y258 94 aa10.31□□□□□ -0.76
PSEN1-213ENST00000555386 KIF26AQ9ULI4 1882 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-213ENST00000555386 CCDC66A2RUB6 948 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 YJEFN3A6XGL0 299 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 E7ENQ6 273 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 H3BQF6 201 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 POLR3GO15318 223 aaPredicted RBP10.3□□□□□ -0.76
PSEN1-213ENST00000555386 COCHO43405 550 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 NARSO43776 548 aaKnown RBP10.3□□□□□ -0.76
PSEN1-213ENST00000555386 TLR5O60602 858 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 GRAP2O75791 330 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 ERBB2P04626 1255 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 HMBSP08397 361 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 TNFAIP3P21580 790 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 YWHAGP61981 247 aaKnown RBP eCLIP10.3□□□□□ -0.76
PSEN1-213ENST00000555386 FMO1Q01740 532 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 CDR2Q01850 454 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 HTR4Q13639 388 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 RAB41Q5JT25 222 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 BTBD8Q5XKL5 378 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 OR6B2Q6IFH4 312 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 HFE2Q6ZVN8 426 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 MTSS1LQ765P7 747 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 SCD5Q86SK9 330 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 DNAAF5Q86Y56 855 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 MIB1Q86YT6 1006 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 ZDHHC14Q8IZN3 488 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 SYCE1Q8N0S2 351 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 AENQ8WTP8 325 aaKnown RBP10.3□□□□□ -0.76
PSEN1-213ENST00000555386 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.3□□□□□ -0.76
PSEN1-213ENST00000555386 RSPRY1Q96DX4 576 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 PBKQ96KB5 322 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 RNF38Q9H0F5 515 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 COMMD8Q9NX08 183 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 IL37Q9NZH6 218 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 STIM2Q9P246 746 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 USP3Q9Y6I4 520 aa10.3□□□□□ -0.76
PSEN1-213ENST00000555386 ZFP37Q9Y6Q3 630 aaPredicted RBP10.3□□□□□ -0.76
PSEN1-213ENST00000555386 CUL9Q8IWT3 2517 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms