RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 OBSL1O75147 1896 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 MDM4O15151 490 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 GREM1O60565 184 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 PRAMEF12O95522 483 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 TRUB2O95900 331 aaKnown RBP13.23□□□□□ -0.29
SYNE2-219ENST00000555323 IGLV3-27P01718 113 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 VIPR2P41587 438 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 PTPN9P43378 593 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 CCZ1BP86790 482 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 CCZ1P86791 482 aaPredicted RBP13.23□□□□□ -0.29
SYNE2-219ENST00000555323 FCHO2Q0JRZ9 810 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 EFEMP1Q12805 493 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 HTR4Q13639 388 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 HTR3DQ70Z44 454 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 DDX42Q86XP3 938 aaKnown RBP eCLIP13.23□□□□□ -0.29
SYNE2-219ENST00000555323 RXFP2Q8WXD0 754 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 CTNNBL1Q8WYA6 563 aaPredicted RBP13.23□□□□□ -0.29
SYNE2-219ENST00000555323 CENPIQ92674 756 aaPredicted RBP13.23□□□□□ -0.29
SYNE2-219ENST00000555323 ARHGEF26Q96DR7 871 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 RSPRY1Q96DX4 576 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 SERPINB11Q96P15 392 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 RPP25Q9BUL9 199 aaKnown RBP13.23□□□□□ -0.29
SYNE2-219ENST00000555323 NACA2Q9H009 215 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 SMG9Q9H0W8 520 aaKnown RBP13.23□□□□□ -0.29
SYNE2-219ENST00000555323 LUC7LQ9NQ29 371 aaKnown RBP13.23□□□□□ -0.29
SYNE2-219ENST00000555323 GKN1Q9NS71 199 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 UVRAGQ9P2Y5 699 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 LIMD1Q9UGP4 676 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 TLR6Q9Y2C9 796 aa13.23□□□□□ -0.29
SYNE2-219ENST00000555323 REXO2Q9Y3B8 237 aaKnown RBP13.23□□□□□ -0.29
SYNE2-219ENST00000555323 SLC12A8A0AV02 714 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 E2F8A0AVK6 867 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 HEPACAM2A8MVW5 462 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 LEFTY2O00292 366 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 DPYSL4O14531 572 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 PJA2O43164 708 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 IRAK2O43187 625 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 STC2O76061 302 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 MTA2O94776 668 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 GJB6O95452 261 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 F9P00740 461 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 PDGFRAP16234 1089 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 GPD1P21695 349 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 GBP1P32455 592 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 ZNF143P52747 638 aaPredicted RBP13.22□□□□□ -0.29
SYNE2-219ENST00000555323 PITX1P78337 314 aaPredicted RBP13.22□□□□□ -0.29
SYNE2-219ENST00000555323 KRT83P78385 493 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 USP4Q13107 963 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 ZNF77Q15935 545 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 CCDC14Q49A88 953 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 TJAP1Q5JTD0 557 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 OTUD1Q5VV17 481 aaPredicted RBP13.22□□□□□ -0.29
SYNE2-219ENST00000555323 DCUN1D2Q6PH85 259 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 VITQ6UXI7 678 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 STRADAQ7RTN6 431 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 TAC4Q86UU9 113 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 MIB1Q86YT6 1006 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.22□□□□□ -0.29
SYNE2-219ENST00000555323 EMC1Q8N766 993 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 RIN3Q8TB24 985 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 BPIFB1Q8TDL5 484 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 SH3RF2Q8TEC5 729 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 DEPDC1BQ8WUY9 529 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 AZIN2Q96A70 460 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 MCEEQ96PE7 176 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 ADAM33Q9BZ11 813 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 PLA2G2FQ9BZM2 168 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 KCNK12Q9HB15 430 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 MYO1AQ9UBC5 1043 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 RASAL2Q9UJF2 1139 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 NUMBLQ9Y6R0 609 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 C5orf42Q9H799 3197 aa13.22□□□□□ -0.29
SYNE2-219ENST00000555323 A0A0A6YYK5 440 aaPredicted RBP13.21□□□□□ -0.29
SYNE2-219ENST00000555323 M0QYT0 321 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 ATMINO43313 823 aaPredicted RBP13.21□□□□□ -0.29
SYNE2-219ENST00000555323 NRDCO43847 1150 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 IPO7O95373 1038 aaKnown RBP13.21□□□□□ -0.29
SYNE2-219ENST00000555323 KLKB1P03952 638 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 PSMC3P17980 439 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 SP100P23497 879 aaPredicted RBP13.21□□□□□ -0.29
SYNE2-219ENST00000555323 SDC4P31431 198 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 HADHBP55084 474 aaKnown RBP13.21□□□□□ -0.29
SYNE2-219ENST00000555323 TBX4P57082 545 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 OGDHQ02218 1023 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 ACAP1Q15027 740 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 Q6ZNB5 142 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 UNC45BQ8IWX7 931 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 RHOT2Q8IXI1 618 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 SLC44A3Q8N4M1 653 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 SLC35G2Q8TBE7 412 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 PLD4Q96BZ4 506 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 FCRL2Q96LA5 508 aaPredicted RBP13.21□□□□□ -0.29
SYNE2-219ENST00000555323 CFAP57Q96MR6 1250 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 TBCBQ99426 244 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 FAM83CQ9BQN1 747 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 CNPY3Q9BT09 278 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 NUP85Q9BW27 656 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 DCLK3Q9C098 648 aa13.21□□□□□ -0.29
SYNE2-219ENST00000555323 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.21□□□□□ -0.29
SYNE2-219ENST00000555323 SMPD4Q9NXE4 827 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms