RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 OLFM2O95897 454 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 PLEKP08567 350 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-214ENST00000554604 ACO1P21399 889 aaKnown RBP13.06□□□□□ -0.32
SHMT2-214ENST00000554604 DRD1P21728 446 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 GALK1P51570 392 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 YWHAEP62258 255 aaKnown RBP13.06□□□□□ -0.32
SHMT2-214ENST00000554604 ZXDBP98169 803 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 KIF5AQ12840 1032 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 KLHDC7AQ5VTJ3 777 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 FSTL4Q6MZW2 842 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 CLEC20AQ6ZU45 233 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 ZBTB44Q8NCP5 570 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 MNS1Q8NEH6 495 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 WHAMMQ8TF30 809 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 TATDN2Q93075 761 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 ARID3AQ99856 593 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 DEF6Q9H4E7 631 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 FAM124BQ9H5Z6 455 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-214ENST00000554604 CCSER2Q9H7U1 834 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 SIX2Q9NPC8 291 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 CDC23Q9UJX2 597 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 GUCA1BQ9UMX6 200 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 COQ4Q9Y3A0 265 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 BZW2Q9Y6E2 419 aaKnown RBP13.06□□□□□ -0.32
SHMT2-214ENST00000554604 KIAA1549LQ6ZVL6 1849 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 FAM92AA1XBS5 289 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 SCAMP3O14828 347 aaKnown RBP13.05□□□□□ -0.32
SHMT2-214ENST00000554604 TLR5O60602 858 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 ATG13O75143 517 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 EGFP01133 1207 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 UCHL3P15374 230 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 SLC9A1P19634 815 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 FMO5P49326 533 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 TUBP50607 506 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 SLC8A3P57103 927 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 CETN1Q12798 172 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 RAPGEF1Q13905 1077 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 ASIC2Q16515 512 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 PPP1R26Q5T8A7 1209 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-214ENST00000554604 SNX30Q5VWJ9 437 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 KIAA1958Q8N8K9 716 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 NELL1Q92832 810 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 CD101Q93033 1021 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 CHFRQ96EP1 664 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 TMEM176AQ96HP8 235 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 CARD6Q9BX69 1037 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 DUSP16Q9BY84 665 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 PNPLA8Q9NP80 782 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 LUC7LQ9NQ29 371 aaKnown RBP13.05□□□□□ -0.32
SHMT2-214ENST00000554604 TBC1D14Q9P2M4 693 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 SCML2Q9UQR0 700 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 SH3BP1Q9Y3L3 701 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 PCDHA13Q9Y5I0 950 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 CEP250Q9BV73 2442 aa13.05□□□□□ -0.32
SHMT2-214ENST00000554604 E2F8A0AVK6 867 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 RCCD1A6NED2 376 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 P4HA2O15460 535 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 RNF40O75150 1001 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 ZDHHC11BP0C7U3 371 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 PRKCIP41743 596 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 RAD23BP54727 409 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 JAM2P57087 298 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 CUL2Q13617 745 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 FBXO43Q4G163 708 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 TDRD12Q587J7 1177 aaKnown RBP13.04□□□□□ -0.32
SHMT2-214ENST00000554604 NAIF1Q69YI7 327 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-214ENST00000554604 HEATR6Q6AI08 1181 aaKnown RBP13.04□□□□□ -0.32
SHMT2-214ENST00000554604 GPRIN1Q7Z2K8 1008 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 FMNL3Q8IVF7 1028 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 CEP112Q8N8E3 955 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 SUMF1Q8NBK3 374 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 SLC4A11Q8NBS3 891 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 RUBCNQ92622 972 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 LACRTQ9GZZ8 138 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 FBRSL1Q9HCM7 1045 aaKnown RBP13.04□□□□□ -0.32
SHMT2-214ENST00000554604 NCDNQ9UBB6 729 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 TRIM10Q9UDY6 481 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 RAB23Q9ULC3 237 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 FHOD1Q9Y613 1164 aa13.04□□□□□ -0.32
SHMT2-214ENST00000554604 CHURC1-FNTBB4DL54 471 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 HHLA1C9JL84 531 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 PMM2O15305 246 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 CYP26A1O43174 497 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 LILRB5O75023 590 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 PAPSS2O95340 614 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-214ENST00000554604 ADH1CP00326 375 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 CYP17A1P05093 508 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 IRF1P10914 325 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 TDGF1P13385 188 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 TBXAS1P24557 533 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-214ENST00000554604 ATP5C1P36542 298 aaKnown RBP13.03□□□□□ -0.32
SHMT2-214ENST00000554604 MAGEA1P43355 309 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 FNTBP49356 437 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 TUBB4BP68371 445 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 KLHL30Q0D2K2 578 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 NAA30Q147X3 362 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-214ENST00000554604 SLC18A3Q16572 532 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 WHAMMP3Q1A5X7 153 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 C10orf76Q5T2E6 689 aa13.03□□□□□ -0.32
SHMT2-214ENST00000554604 ADGRG2Q8IZP9 1017 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms