RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 ANKRD34BA5PLL1 514 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 KLRF2D3W0D1 207 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 DDX39AO00148 427 aaKnown RBP6.25□□□□□ -1.41
ATXN3-226ENST00000554350 ARNTLO00327 626 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 SGSM2O43147 1006 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 SH3BP5O60239 455 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 APBB3O95704 486 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 KRT10P13645 584 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 SFPQP23246 707 aaKnown RBP eCLIP6.25□□□□□ -1.41
ATXN3-226ENST00000554350 KIF5BP33176 963 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 THBS2P35442 1172 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 IL12RB1P42701 662 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 NASPP49321 788 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-226ENST00000554350 RAB27AP51159 221 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 CXADRP78310 365 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 NUCB2P80303 420 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 SCRN1Q12765 414 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 LY6DQ14210 128 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 GRM4Q14833 912 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 USP39Q53GS9 565 aaKnown RBP6.25□□□□□ -1.41
ATXN3-226ENST00000554350 TMCO4Q5TGY1 634 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 FUT10Q6P4F1 479 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 USP17L6PQ6QN14 398 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 VHLLQ6RSH7 139 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 TOGARAM2Q6ZUX3 1019 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 C11orf74Q86VG3 221 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 RALGPS2Q86X27 583 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-226ENST00000554350 MIB1Q86YT6 1006 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 FMNL3Q8IVF7 1028 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 OR2I1PQ8NGU4 316 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 RABGGTAQ92696 567 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 TCEAL4Q96EI5 215 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 MBOAT7Q96N66 472 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 GBP4Q96PP9 640 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 PIGSQ96S52 555 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 LGR4Q9BXB1 951 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 GCOM2Q9BZD3 368 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-226ENST00000554350 SLKQ9H2G2 1235 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-226ENST00000554350 ZNF302Q9NR11 478 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 ANAPC4Q9UJX5 808 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 PCDHB2Q9Y5E7 798 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 HEMK1Q9Y5R4 338 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-226ENST00000554350 ATG2BQ96BY7 2078 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 C2CD3Q4AC94 2353 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 NOTCH4Q99466 2003 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 COL4A2P08572 1712 aa6.25□□□□□ -1.41
ATXN3-226ENST00000554350 WDR27A2RRH5 827 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 MYBPHLA2RUH7 354 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 FAM149AA5PLN7 773 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 HEPACAM2A8MVW5 462 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 TADA2AO75478 443 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 KCNH1O95259 989 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 LRG1P02750 347 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 THBDP07204 575 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 C6P13671 934 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 PTPN2P17706 415 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 BCKDHBP21953 392 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 GPC3P51654 580 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 GFPT1Q06210 699 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-226ENST00000554350 GRSF1Q12849 480 aaKnown RBP eCLIP6.24□□□□□ -1.41
ATXN3-226ENST00000554350 PSMD5Q16401 504 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 PPP2R5EQ16537 467 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 CCDC157Q569K6 752 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 C2orf27AQ580R0 203 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 VPS53Q5VIR6 699 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 TSHZ3Q63HK5 1081 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 PCSK4Q6UW60 755 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 MFSD6Q6ZSS7 791 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 PDZD4Q76G19 769 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-226ENST00000554350 CATSPER4Q7RTX7 472 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 HAUS6Q7Z4H7 955 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 IQCA1Q86XH1 822 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 DGKHQ86XP1 1220 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 TICAM2Q86XR7 235 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 NAXDQ8IW45 347 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 MFSD6LQ8IWD5 586 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 COLGALT2Q8IYK4 626 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 RNF168Q8IYW5 571 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-226ENST00000554350 MINDY1Q8N5J2 469 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 FRS2Q8WU20 508 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 ESR2Q92731 530 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 SMARCD2Q92925 531 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 GPATCH3Q96I76 525 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 MRGPRX3Q96LB0 322 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 SEMA4CQ9C0C4 833 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 ECHDC1Q9NTX5 307 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 GTSE1Q9NYZ3 720 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 TCEAL9Q9UHQ7 104 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 MYRFQ9Y2G1 1151 aa6.24□□□□□ -1.41
ATXN3-226ENST00000554350 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-226ENST00000554350 COL5A1P20908 1838 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-226ENST00000554350 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 ZNF197O14709 1029 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 MAGEB2O15479 319 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 FGRP09769 529 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 HLA-EP13747 358 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 CD59P13987 128 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 MX1P20591 662 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 ADSSP30520 456 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 MLLT6P55198 1093 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms