RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 SNHG28P0DPA3 235 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 CYP3A7P24462 503 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 KLRC1P26715 233 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 CHRNA3P32297 505 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 STAT1P42224 750 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 TXKP42681 527 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 KLK7P49862 253 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 PTENP60484 403 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 GUCY1A3Q02108 690 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 TAP1Q03518 808 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 KLRC3Q07444 240 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 ZNF844Q08AG5 666 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 EXOC3L4Q17RC7 722 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 TKFCQ3LXA3 575 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 IQSEC1Q6DN90 963 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 CYB5D1Q6P9G0 228 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 KCNV1Q6PIU1 500 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 CPLX4Q7Z7G2 160 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 LRRC57Q8N9N7 239 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 CCDC197Q8NCU1 140 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 NEK9Q8TD19 979 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 ARNTL2Q8WYA1 636 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 RFFLQ8WZ73 363 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 TLCD1Q96CP7 247 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 DNAJC19Q96DA6 116 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 HES6Q96HZ4 224 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 SCLYQ96I15 445 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 RSRC1Q96IZ7 334 aaKnown RBP6.27□□□□□ -1.41
VPS33B-203ENST00000554264 IFT74Q96LB3 600 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 DEPDC7Q96QD5 511 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 FMO2Q99518 471 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.27□□□□□ -1.41
VPS33B-203ENST00000554264 SPATA9Q9BWV2 254 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 ROPN1BQ9BZX4 212 aaPredicted RBP6.27□□□□□ -1.41
VPS33B-203ENST00000554264 KCNH6Q9H252 994 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 EPB41L4BQ9H329 900 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 PABPC3Q9H361 631 aaKnown RBP6.27□□□□□ -1.41
VPS33B-203ENST00000554264 ACAD9Q9H845 621 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 CERS4Q9HA82 394 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 ROPN1Q9HAT0 212 aaPredicted RBP6.27□□□□□ -1.41
VPS33B-203ENST00000554264 RAVER2Q9HCJ3 691 aaKnown RBP6.27□□□□□ -1.41
VPS33B-203ENST00000554264 HOMER3Q9NSC5 361 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 TYW1Q9NV66 732 aaKnown RBP6.27□□□□□ -1.41
VPS33B-203ENST00000554264 KCND2Q9NZV8 630 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 SAMD15Q9P1V8 674 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 SEL1LQ9UBV2 794 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 FEM1BQ9UK73 627 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 SYNPO2Q9UMS6 1093 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 NENFQ9UMX5 172 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 PCDHA12Q9UN75 941 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 NOC2LQ9Y3T9 749 aaKnown RBP6.27□□□□□ -1.41
VPS33B-203ENST00000554264 RWDD3Q9Y3V2 267 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 HCFC2Q9Y5Z7 792 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 NFS1Q9Y697 457 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 ASTN1O14525 1302 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 ZNF536O15090 1300 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 MYO9BQ13459 2157 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 A0A087X0T9 212 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 EPOPA6NHQ4 379 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 F8VZ95 297 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 AGRPO00253 132 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 CLGNO14967 610 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 EPHB6O15197 1021 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 NCK2O43639 380 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 BUB1O43683 1085 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 MGRN1O60291 552 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 CEP104O60308 925 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 BAIAP3O94812 1187 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 LUC7L3O95232 432 aaKnown RBP6.26□□□□□ -1.41
VPS33B-203ENST00000554264 KRT18P05783 430 aaKnown RBP6.26□□□□□ -1.41
VPS33B-203ENST00000554264 FAM228BP0C875 321 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 ALADP13716 330 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 LCP1P13796 627 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 UCHL3P15374 230 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 NR2F2P24468 414 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 CXCR5P32302 372 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 ELF1P32519 619 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 SKIV2L2P42285 1042 aaKnown RBP6.26□□□□□ -1.41
VPS33B-203ENST00000554264 PDE6CP51160 858 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 GUCY2FP51841 1108 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 PSMC6P62333 389 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 YBX1P67809 324 aaKnown RBP6.26□□□□□ -1.41
VPS33B-203ENST00000554264 CAV1Q03135 178 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 CETN1Q12798 172 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 IFT88Q13099 833 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 ADAM9Q13443 819 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 ALCAMQ13740 583 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 PPP2R5AQ15172 486 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 KNOP1Q1ED39 458 aaKnown RBP6.26□□□□□ -1.41
VPS33B-203ENST00000554264 KRT71Q3SY84 523 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 MTERF2Q49AM1 385 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 ANKRD20A8PQ5CZ79 823 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 ERMARDQ5T6L9 678 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 DENND2CQ68D51 928 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 KCTD16Q68DU8 428 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 C11orf63Q6NUN7 778 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 ALKBH5Q6P6C2 394 aaKnown RBP6.26□□□□□ -1.41
VPS33B-203ENST00000554264 SYDE1Q6ZW31 735 aaPredicted RBP6.26□□□□□ -1.41
VPS33B-203ENST00000554264 DEFB128Q7Z7B8 93 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 FUKQ8N0W3 1084 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms