RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 KDELR1P24390 212 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 CCR1P32246 355 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 IRS1P35568 1242 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 GJC1P36383 396 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 RING1Q06587 406 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 NME3Q13232 169 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 PPP2R5DQ14738 602 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 TAZQ16635 292 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 PPM1LQ5SGD2 360 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 ZFYVE27Q5T4F4 411 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 ERMARDQ5T6L9 678 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 TXNRD3NBQ6F5E7 133 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 SCYL2Q6P3W7 929 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 DNAJB7Q7Z6W7 309 aaPredicted RBP7.96□□□□□ -1.14
TDP1-209ENST00000554180 FAM131BQ86XD5 332 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 CCDC50Q8IVM0 306 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 LEMD2Q8NC56 503 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 FAM71BQ8TC56 605 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 ARNTL2Q8WYA1 636 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 ZNF512Q96ME7 567 aaPredicted RBP7.96□□□□□ -1.14
TDP1-209ENST00000554180 PEBP4Q96S96 227 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 ZNF670Q9BS34 389 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 SNRNP25Q9BV90 132 aaKnown RBP7.96□□□□□ -1.14
TDP1-209ENST00000554180 OSBPL8Q9BZF1 889 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 ZWILCHQ9H900 591 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 PRDM16Q9HAZ2 1276 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 PIGVQ9NUD9 493 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.96□□□□□ -1.14
TDP1-209ENST00000554180 OSER1Q9NX31 292 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 ZDHHC7Q9NXF8 308 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.96□□□□□ -1.14
TDP1-209ENST00000554180 TRPM5Q9NZQ8 1165 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 CALCOCO1Q9P1Z2 691 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 PCSK1NQ9UHG2 260 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 FZD10Q9ULW2 581 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 MAGED2Q9UNF1 606 aaPredicted RBP7.96□□□□□ -1.14
TDP1-209ENST00000554180 TLR6Q9Y2C9 796 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 hCG_1818297A0A087WSY0 165 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 C3orf70A6NLC5 250 aaPredicted RBP7.95□□□□□ -1.14
TDP1-209ENST00000554180 SOBPA7XYQ1 873 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 EFCAB8A8MWE9 144 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 PDE2AO00408 941 aaPredicted RBP7.95□□□□□ -1.14
TDP1-209ENST00000554180 XYLBO75191 536 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 TADA3O75528 432 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 TJP3O95049 919 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 OAS1P00973 400 aaKnown RBP7.95□□□□□ -1.14
TDP1-209ENST00000554180 F11P03951 625 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 RARGP13631 454 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 CDC25CP30307 473 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 HTR7P34969 479 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 ADRA1BP35368 520 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 CDKN2BP42772 138 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 PGFP49763 221 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 ARSEP51690 589 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 TERF1P54274 439 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 EPHA5P54756 1037 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 CDH6P55285 790 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 PITX1P78337 314 aaPredicted RBP7.95□□□□□ -1.14
TDP1-209ENST00000554180 KLF1Q13351 362 aaPredicted RBP7.95□□□□□ -1.14
TDP1-209ENST00000554180 ZNF211Q13398 564 aaPredicted RBP7.95□□□□□ -1.14
TDP1-209ENST00000554180 TRIP4Q15650 581 aaPredicted RBP7.95□□□□□ -1.14
TDP1-209ENST00000554180 DUSP6Q16828 381 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 LONRF2Q1L5Z9 754 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 SMTNL2Q2TAL5 461 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 LRIT3Q3SXY7 679 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 EFHC2Q5JST6 749 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 KCNT1Q5JUK3 1230 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 C10orf120Q5SQS8 335 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 HECTD3Q5T447 861 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 MFSD7Q6UXD7 560 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 SPOCD1Q6ZMY3 1216 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 SLC13A5Q86YT5 568 aaPredicted RBP7.95□□□□□ -1.14
TDP1-209ENST00000554180 KCTD6Q8NC69 237 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 SPATA4Q8NEY3 305 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 SLC22A17Q8WUG5 538 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 RAPGEF5Q92565 580 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 CASP10Q92851 521 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 FAF2Q96CS3 445 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 MRPL38Q96DV4 380 aaKnown RBP7.95□□□□□ -1.14
TDP1-209ENST00000554180 SLC39A13Q96H72 371 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 GCNAQ96QF7 691 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 HAPLN3Q96S86 360 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 CARD6Q9BX69 1037 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 FRMD8P1Q9BZ68 369 aaPredicted RBP7.95□□□□□ -1.14
TDP1-209ENST00000554180 WDCPQ9H6R7 721 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 MAN1C1Q9NR34 630 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 ASAH2Q9NR71 780 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 HOMER3Q9NSC5 361 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.95□□□□□ -1.14
TDP1-209ENST00000554180 ARHGEF38Q9NXL2 777 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 MARCH2Q9P0N8 246 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 ZMYM5Q9UJ78 669 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 DNMT3LQ9UJW3 386 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 AP4E1Q9UPM8 1137 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 HBS1LQ9Y450 684 aaKnown RBP7.95□□□□□ -1.14
TDP1-209ENST00000554180 CLUHO75153 1309 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 MYO7AQ13402 2215 aa7.95□□□□□ -1.14
TDP1-209ENST00000554180 GBF1Q92538 1859 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 TRANK1O15050 2925 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 KRIT1O00522 736 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms