RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 GUCY2FP51841 1108 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 VAV2P52735 878 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 APBA1Q02410 837 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 KRT17Q04695 432 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 DSC1Q08554 894 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 INCA1Q0VD86 236 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 SMARCB1Q12824 385 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 INPP5AQ14642 412 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 PTPN14Q15678 1187 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 MLANAQ16655 118 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 ASTE1Q2TB18 679 aaPredicted RBP5.3□□□□□ -1.56
VTI1B-202ENST00000553619 CLLU1OSQ5K130 101 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 DNTTIP2Q5QJE6 756 aaKnown RBP5.3□□□□□ -1.56
VTI1B-202ENST00000553619 LIN9Q5TKA1 542 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 ACAD10Q6JQN1 1059 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 RAD9BQ6WBX8 426 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 ZNF365Q70YC5 407 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 H2AFVQ71UI9 128 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 ZNF571Q7Z3V5 609 aaPredicted RBP5.3□□□□□ -1.56
VTI1B-202ENST00000553619 RHOT2Q8IXI1 618 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 COLGALT2Q8IYK4 626 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 CMTR2Q8IYT2 770 aaKnown RBP5.3□□□□□ -1.56
VTI1B-202ENST00000553619 C7orf61Q8IZ16 206 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 DCP1BQ8IZD4 617 aaKnown RBP5.3□□□□□ -1.56
VTI1B-202ENST00000553619 ADGRF2Q8IZF7 708 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 CCAR2Q8N163 923 aaKnown RBP5.3□□□□□ -1.56
VTI1B-202ENST00000553619 LRRC43Q8N309 656 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 RNF10Q8N5U6 811 aaKnown RBP5.3□□□□□ -1.56
VTI1B-202ENST00000553619 UBR7Q8N806 425 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 TMEM35BQ8NCS4 154 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 SLC30A5Q8TAD4 765 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 ZNF606Q8WXB4 792 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 LINC01599Q8WXQ3 324 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 CTNNBL1Q8WYA6 563 aaPredicted RBP5.3□□□□□ -1.56
VTI1B-202ENST00000553619 BADQ92934 168 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 KAT5Q92993 513 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 LIN37Q96GY3 246 aaPredicted RBP5.3□□□□□ -1.56
VTI1B-202ENST00000553619 CCDC120Q96HB5 630 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 ABHD8Q96I13 439 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 VCPIP1Q96JH7 1222 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 SLC9A7Q96T83 725 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 SLC38A3Q99624 504 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 ACBD6Q9BR61 282 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 KRTAP4-9Q9BYQ8 210 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 GPR88Q9GZN0 384 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 LHX5Q9H2C1 402 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 NRDE2Q9H7Z3 1164 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 FBRSQ9HAH7 460 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 TBC1D13Q9NVG8 400 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 HESX1Q9UBX0 185 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 TUBGCP4Q9UGJ1 667 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 LCMT1Q9UIC8 334 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 CDH9Q9ULB4 789 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 SSX2IPQ9Y2D8 614 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 PPP2R2CQ9Y2T4 447 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 RWDD3Q9Y3V2 267 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 INSL6Q9Y581 213 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 TANC1Q9C0D5 1861 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 A0A087X0T9 212 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 A0A0A6YYK5 440 aaPredicted RBP5.29□□□□□ -1.56
VTI1B-202ENST00000553619 CASTOR2A6NHX0 329 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 MEIS3P2A8K0S8 358 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 BTNL10A8MVZ5 291 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 DDX3XO00571 662 aaKnown RBP eCLIP5.29□□□□□ -1.56
VTI1B-202ENST00000553619 GABRDO14764 452 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 NRP1O14786 923 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 PJA2O43164 708 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 KIF5CO60282 957 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 LSM8O95777 96 aaKnown RBP5.29□□□□□ -1.56
VTI1B-202ENST00000553619 FTLP02792 175 aaPredicted RBP5.29□□□□□ -1.56
VTI1B-202ENST00000553619 CYP1A1P04798 512 aaPredicted RBP5.29□□□□□ -1.56
VTI1B-202ENST00000553619 CALB1P05937 261 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 PGRP06401 933 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 GALTP07902 379 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 PLEKP08567 350 aaPredicted RBP5.29□□□□□ -1.56
VTI1B-202ENST00000553619 PDGFRBP09619 1106 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 FAM228BP0C875 321 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 SETSIPP0DME0 302 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 ACRP10323 421 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 DESP17661 470 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 PTPN1P18031 435 aaKnown RBP5.29□□□□□ -1.56
VTI1B-202ENST00000553619 LAG3P18627 525 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 PPM1AP35813 382 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 ETV3P41162 512 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 ACADSBP45954 432 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 NSFP46459 744 aaKnown RBP5.29□□□□□ -1.56
VTI1B-202ENST00000553619 AARSP49588 968 aaKnown RBP eCLIP5.29□□□□□ -1.56
VTI1B-202ENST00000553619 NDST1P52848 882 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 RAD23BP54727 409 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 NAP1L1P55209 391 aaKnown RBP5.29□□□□□ -1.56
VTI1B-202ENST00000553619 CDH8P55286 799 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 WDR5P61964 334 aaKnown RBP5.29□□□□□ -1.56
VTI1B-202ENST00000553619 GPC5P78333 572 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 TSPY1Q01534 308 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 YWHAHQ04917 246 aaPredicted RBP5.29□□□□□ -1.56
VTI1B-202ENST00000553619 GFPT1Q06210 699 aaPredicted RBP5.29□□□□□ -1.56
VTI1B-202ENST00000553619 SEPT6Q14141 434 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 BTG3Q14201 252 aaPredicted RBP5.29□□□□□ -1.56
VTI1B-202ENST00000553619 SOWAHAQ2M3V2 549 aa5.29□□□□□ -1.56
VTI1B-202ENST00000553619 TIGD5Q53EQ6 642 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms