RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 OTOAQ7RTW8 1153 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 LIMS2Q7Z4I7 341 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 RAB3IL1Q8TBN0 382 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 ERP27Q96DN0 273 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 TNIP3Q96KP6 325 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 PPP1R16BQ96T49 567 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 TINF2Q9BSI4 451 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 TRIM55Q9BYV6 548 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 TRIM6Q9C030 488 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-205ENST00000553474 SLCO1B3Q9NPD5 702 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 SNTG2Q9NY99 539 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 SRRDQ9UH36 339 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 BAIAP2L1Q9UHR4 511 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 GJD2Q9UKL4 321 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 CHKBQ9Y259 395 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 SF3B1O75533 1304 aaKnown RBP eCLIP13.39□□□□□ -0.275e-8■■■■■ 37.4
SHMT2-205ENST00000553474 PIRO00625 290 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 GPR32O75388 356 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 KRT38O76015 456 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 SNRPAP09012 282 aaKnown RBP13.38□□□□□ -0.27
SHMT2-205ENST00000553474 MLNP12872 115 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 DARSP14868 501 aaKnown RBP13.38□□□□□ -0.27
SHMT2-205ENST00000553474 KCNE1P15382 129 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 CYP2F1P24903 491 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 ADRA1DP25100 572 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 RBL1P28749 1068 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 L1CAMP32004 1257 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 ETV4P43268 484 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 RGS7P49802 495 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 SERPINB9P50453 376 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 SLC8A3P57103 927 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 KCNJ2P63252 427 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 DBN1Q16643 649 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 SOWAHAQ2M3V2 549 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 CCNJLQ8IV13 435 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 SCUBE3Q8IX30 993 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 OR6B3Q8NGW1 331 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 RAET1EQ8TD07 263 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 ZMAT2Q96NC0 199 aaKnown RBP13.38□□□□□ -0.27
SHMT2-205ENST00000553474 MYLK2Q9H1R3 596 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 YY1AP1Q9H869 796 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 ETNK1Q9HBU6 452 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 POPDC2Q9HBU9 364 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 CD248Q9HCU0 757 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 FLRT1Q9NZU1 646 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 ZC3H7BQ9UGR2 993 aaKnown RBP13.38□□□□□ -0.27
SHMT2-205ENST00000553474 HEY1Q9Y5J3 304 aa13.38□□□□□ -0.27
SHMT2-205ENST00000553474 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-205ENST00000553474 KPNA7A9QM74 516 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 GRAP2O75791 330 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 F2P00734 622 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 APOEP02649 317 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 C1QAP02745 245 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 ELNP15502 786 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 FDFT1P37268 417 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 SF3A3Q12874 501 aaKnown RBP eCLIP13.37□□□□□ -0.276e-8■■□□□ 12.4
SHMT2-205ENST00000553474 KIZQ2M2Z5 673 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 SV2CQ496J9 727 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 IGDCC3Q8IVU1 814 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 ANKLE1Q8NAG6 615 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 CFAP61Q8NHU2 1237 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 MRRFQ96E11 262 aaKnown RBP13.37□□□□□ -0.27
SHMT2-205ENST00000553474 QKIQ96PU8 341 aaKnown RBP eCLIP13.37□□□□□ -0.27
SHMT2-205ENST00000553474 IQCGQ9H095 443 aaKnown RBP13.37□□□□□ -0.27
SHMT2-205ENST00000553474 EBF2Q9HAK2 575 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 FAM49BQ9NUQ9 324 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 LNPEPQ9UIQ6 1025 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 GGT7Q9UJ14 662 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 TTLL3Q9Y4R7 772 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-205ENST00000553474 XPO1O14980 1071 aaKnown RBP13.37□□□□□ -0.27
SHMT2-205ENST00000553474 ATP5BP06576 529 aaKnown RBP13.37□□□□□ -0.27
SHMT2-205ENST00000553474 APRTP07741 180 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 GNL1P36915 607 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-205ENST00000553474 ARL4AP40617 200 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 CDK18Q07002 472 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 SEMA5AQ13591 1074 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 HEATR6Q6AI08 1181 aaKnown RBP13.37□□□□□ -0.27
SHMT2-205ENST00000553474 NLRP9Q7RTR0 991 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 CAND1Q86VP6 1230 aaKnown RBP13.37□□□□□ -0.27
SHMT2-205ENST00000553474 TOP6BLQ8N6T0 577 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 APPL2Q8NEU8 664 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 GSDMBQ8TAX9 411 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 SPOCK2Q92563 424 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 ANKRD27Q96NW4 1050 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 TSSK1BQ9BXA7 367 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 SNX25Q9H3E2 840 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 EIF2B3Q9NR50 452 aaKnown RBP13.37□□□□□ -0.27
SHMT2-205ENST00000553474 SETD4Q9NVD3 440 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.37□□□□□ -0.27
SHMT2-205ENST00000553474 AP4E1Q9UPM8 1137 aa13.37□□□□□ -0.27
SHMT2-205ENST00000553474 MTO1Q9Y2Z2 717 aaKnown RBP13.37□□□□□ -0.27
SHMT2-205ENST00000553474 COPEO14579 308 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 DNAJC6O75061 913 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 RECQL4O94761 1208 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 STK10O94804 968 aaKnown RBP13.36□□□□□ -0.27
SHMT2-205ENST00000553474 GNRH1P01148 92 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 KRT16P08779 473 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 CCNFP41002 786 aa13.36□□□□□ -0.27
SHMT2-205ENST00000553474 MATKP42679 507 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms