RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 SAC3D1A6NKF1 404 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 SLC38A8A6NNN8 435 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 STX16-NPEPL1H3BU86 382 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 STX16O14662 325 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 KIAA0355O15063 1070 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 TMEM225BP0DP42 221 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 YY1P25490 414 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 HNRNPMP52272 730 aaKnown RBP eCLIP5.67□□□□□ -1.5
SCFD1-209ENST00000553280 CASP6P55212 293 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 FAM189BP81408 668 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 CRHR2Q13324 411 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 PDE1CQ14123 709 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-209ENST00000553280 DCTN1Q14203 1278 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 KCNJ12Q14500 433 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 KCTD2Q14681 263 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 RABL3Q5HYI8 236 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 WDR45BQ5MNZ6 344 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 SLC9C2Q5TAH2 1124 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 CCDC144NLQ6NUI1 221 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 OR4N4Q8N0Y3 316 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 SUPT20HQ8NEM7 779 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 KTI12Q96EK9 354 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-209ENST00000553280 SERHL2Q9H4I8 314 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 OLA1Q9NTK5 396 aaKnown RBP5.67□□□□□ -1.5
SCFD1-209ENST00000553280 BAG5Q9UL15 447 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 TBX20Q9UMR3 447 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 AFG3L2Q9Y4W6 797 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 RPS6KL1Q9Y6S9 549 aa5.67□□□□□ -1.5
SCFD1-209ENST00000553280 FER1L4A9Z1Z3 1794 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 TRGV11A0A075B6L2 103 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 DYTNA2CJ06 578 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 VWA3AA6NCI4 1184 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 SEPT4O43236 478 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 NCR1O76036 304 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 ERBB2P04626 1255 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 HNRNPA1P09651 372 aaKnown RBP eCLIP5.66□□□□□ -1.5
SCFD1-209ENST00000553280 GDF5P43026 501 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 DGKQP52824 942 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 EIF4A1P60842 406 aaKnown RBP5.66□□□□□ -1.5
SCFD1-209ENST00000553280 RESTQ13127 1097 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 SEMA3BQ13214 749 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 BAK1Q16611 211 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 ST3GAL2Q16842 350 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 BEAN1Q3B7T3 259 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 AASDHQ4L235 1098 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-209ENST00000553280 USP39Q53GS9 565 aaKnown RBP5.66□□□□□ -1.5
SCFD1-209ENST00000553280 GPATCH4Q5T3I0 446 aaKnown RBP5.66□□□□□ -1.5
SCFD1-209ENST00000553280 ACAD10Q6JQN1 1059 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 CAND1Q86VP6 1230 aaKnown RBP5.66□□□□□ -1.5
SCFD1-209ENST00000553280 CCDC89Q8N998 374 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 SOCS4Q8WXH5 440 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 GLG1Q92896 1179 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 ZUFSPQ96AP4 578 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 REXO5Q96IC2 774 aaKnown RBP5.66□□□□□ -1.5
SCFD1-209ENST00000553280 C7orf26Q96N11 449 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 EIF3CQ99613 913 aaKnown RBP5.66□□□□□ -1.5
SCFD1-209ENST00000553280 ZNF341Q9BYN7 854 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 ZNF768Q9H5H4 540 aaKnown RBP5.66□□□□□ -1.5
SCFD1-209ENST00000553280 NRDE2Q9H7Z3 1164 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 PLEKHA5Q9HAU0 1116 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 GLOD4Q9HC38 313 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 KCNK9Q9NPC2 374 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 AASSQ9UDR5 926 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 ARHGAP26Q9UNA1 814 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 PCDHB7Q9Y5E2 793 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 HS3ST3A1Q9Y663 406 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 CYP46A1Q9Y6A2 500 aa5.66□□□□□ -1.5
SCFD1-209ENST00000553280 A1L4Q6 167 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 A8MVJ9 347 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 SLC16A3O15427 465 aaKnown RBP5.65□□□□□ -1.5
SCFD1-209ENST00000553280 VNN1O95497 513 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 PDHA1P08559 390 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 PPP3CBP16298 524 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 DRD1P21728 446 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 BMPR1AP36894 532 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 RBM6P78332 1123 aaKnown RBP5.65□□□□□ -1.5
SCFD1-209ENST00000553280 ITIH3Q06033 890 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 PDCLQ13371 301 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 TOB2Q14106 344 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-209ENST00000553280 AAK1Q2M2I8 961 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 ZNF484Q5JVG2 852 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 CCDC30Q5VVM6 783 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 NAA35Q5VZE5 725 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 ANO7Q6IWH7 933 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 NEK10Q6ZWH5 1172 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 FSIP1Q8NA03 581 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 ADAMTS18Q8TE60 1221 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 UCMAQ8WVF2 138 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 EXTL1Q92935 676 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 PLEKHA2Q9HB19 425 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 FBXO28Q9NVF7 368 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 DKK2Q9UBU2 259 aa5.65□□□□□ -1.5
SCFD1-209ENST00000553280 UBE2J1Q9Y385 318 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-209ENST00000553280 K7ENM7 598 aa5.64□□□□□ -1.51
SCFD1-209ENST00000553280 M0QZQ0 153 aa5.64□□□□□ -1.51
SCFD1-209ENST00000553280 PSMD9O00233 223 aa5.64□□□□□ -1.51
SCFD1-209ENST00000553280 TIMM44O43615 452 aa5.64□□□□□ -1.51
SCFD1-209ENST00000553280 FZD7O75084 574 aa5.64□□□□□ -1.51
SCFD1-209ENST00000553280 CDKL5O76039 1030 aa5.64□□□□□ -1.51
SCFD1-209ENST00000553280 TMEM63AO94886 807 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms