RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 HFE2Q6ZVN8 426 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 PAXIP1Q6ZW49 1069 aaPredicted RBP14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 RNF169Q8NCN4 708 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 FBF1Q8TES7 1133 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 CKAP2Q8WWK9 683 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 PCED1BQ96HM7 432 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 ULBP1Q9BZM6 244 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 KLC2Q9H0B6 622 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 ACSS3Q9H6R3 686 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 POPDC2Q9HBU9 364 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 ETNK2Q9NVF9 386 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 NKIRAS1Q9NYS0 192 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 PSMC3IPQ9P2W1 217 aaPredicted RBP14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 M0QYT0 321 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 GCATO75600 419 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 VIMP08670 466 aaKnown RBP14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 ELNP15502 786 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 ATP2A2P16615 1042 aaKnown RBP14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 PCSK1P29120 753 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 ELK3P41970 407 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 DAOAP59103 153 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 IFT88Q13099 833 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 MTM1Q13496 603 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 KLHL38Q2WGJ6 581 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 RAB41Q5JT25 222 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 FAM26DQ5JW98 314 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 FAM182AQ5T1J6 154 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 PIGWQ7Z7B1 504 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 IGDCC3Q8IVU1 814 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 PCSK9Q8NBP7 692 aaKnown RBP14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 ZMIZ2Q8NF64 920 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 CCDC110Q8TBZ0 833 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 LRRN4Q8WUT4 740 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 QKIQ96PU8 341 aaKnown RBP eCLIP14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 DHRS4Q9BTZ2 278 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 RNF186Q9NXI6 227 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 SENP1Q9P0U3 644 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 CHMP2BQ9UQN3 213 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 TEX264Q9Y6I9 313 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 TDRD15B5MCY1 1934 aaKnown RBP14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 DGKIO75912 1065 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 POMCP01189 267 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 FYNP06241 537 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 ODC1P11926 461 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 KRT15P19012 456 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 RABGGTBP53611 331 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 DEUP1Q05D60 604 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 TRIM71Q2Q1W2 868 aaKnown RBP14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 SYCP2LQ5T4T6 812 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 KCNT2Q6UVM3 1135 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 PGBD4Q96DM1 585 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 CABS1Q96KC9 395 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 KCNK16Q96T55 309 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 ADAM2Q99965 735 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 RTP3Q9BQQ7 232 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 TRABDQ9H4I3 376 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 ETNK1Q9HBU6 452 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 MLXIPLQ9NP71 852 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 CNGB3Q9NQW8 809 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 TMEM30AQ9NV96 361 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 DTLQ9NZJ0 730 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 MFHAS1Q9Y4C4 1052 aa14.53□□□□□ -0.08
RAB3IP-216ENST00000552199 SYNJ2BP-COX16A0A087WUM0 186 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 FAM47DPA6NHR8 397 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 HACD1B0YJ81 288 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 HHLA1C9JL84 531 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 H3BRJ5 948 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 TRIM66O15016 1216 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 PRPF4O43172 522 aaKnown RBP eCLIP14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 CACNA2D1P54289 1103 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 ITGA7Q13683 1181 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 EFTUD2Q15029 972 aaKnown RBP eCLIP14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 FAXCQ5TGI0 409 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 ADGRD1Q6QNK2 874 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 CD300LGQ6UXG3 332 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 BZW1Q7L1Q6 419 aaKnown RBP14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 GPRIN1Q7Z2K8 1008 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 TAX1BP1Q86VP1 789 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 OTUD6BQ8N6M0 293 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 MRRFQ96E11 262 aaKnown RBP14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 NSRP1Q9H0G5 558 aaKnown RBP14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 ARHGEF4Q9NR80 690 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 PIGVQ9NUD9 493 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 TRMT13Q9NUP7 481 aaKnown RBP14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 COX16Q9P0S2 106 aa14.52□□□□□ -0.09
RAB3IP-216ENST00000552199 YJEFN3A6XGL0 299 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 TCP11X1B4DZS4 312 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 C9IYK1 514 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 E7ENQ6 273 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 I3L4J1 428 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 CAPN9O14815 690 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 AVILO75366 819 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 B3GAT3O94766 335 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 CYP11A1P05108 521 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 SKIP12755 728 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 STX2P32856 288 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 SLC18A1P54219 525 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 SP3Q02447 781 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 GRIK3Q13003 919 aa14.51□□□□□ -0.09
RAB3IP-216ENST00000552199 NME3Q13232 169 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms