RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 ME1P48163 572 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 MESP2Q0VG99 397 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 LMAN2Q12907 356 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 STK4Q13043 487 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 SGSM1Q2NKQ1 1148 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 ZACNQ401N2 412 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 LY6G5CQ5SRR4 150 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 LPCAT2Q7L5N7 544 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 UNC93AQ86WB7 457 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 SFTPA1Q8IWL2 248 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 BBS7Q8IWZ6 715 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 CRYBG2Q8N1P7 616 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 BEND7Q8N7W2 519 aaPredicted RBP8.06□□□□□ -1.12
NEK3-201ENST00000550331 KIAA0895Q8NCT3 520 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 DEFB124Q8NES8 71 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 SCAMP5Q8TAC9 235 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 PLEKHO2Q8TD55 490 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 TAF4BQ92750 862 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 MED10Q9BTT4 135 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 NACA2Q9H009 215 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 SDCBP2Q9H190 292 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 FBXO44Q9H4M3 255 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 CCSER2Q9H7U1 834 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 CSNK1G1Q9HCP0 422 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 TMEM9BQ9NQ34 198 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 CYLDQ9NQC7 956 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 DEC1Q9P2X7 70 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 CHORDC1Q9UHD1 332 aaPredicted RBP8.06□□□□□ -1.12
NEK3-201ENST00000550331 EVLQ9UI08 416 aaPredicted RBP8.06□□□□□ -1.12
NEK3-201ENST00000550331 CFAP45Q9UL16 551 aa8.06□□□□□ -1.12
NEK3-201ENST00000550331 FLNBO75369 2602 aaKnown RBP8.06□□□□□ -1.12
NEK3-201ENST00000550331 GON4LQ3T8J9 2241 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 PATE3B3GLJ2 98 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 PDXKO00764 312 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 CDX4O14627 284 aaPredicted RBP8.05□□□□□ -1.12
NEK3-201ENST00000550331 MAPK13O15264 365 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 HYAL3O43820 417 aaPredicted RBP8.05□□□□□ -1.12
NEK3-201ENST00000550331 KLRC4O43908 158 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 TLR5O60602 858 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 TULP3O75386 442 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 AP1G2O75843 785 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 VNN1O95497 513 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 ASS1P00966 412 aaKnown RBP8.05□□□□□ -1.12
NEK3-201ENST00000550331 NR3C1P04150 777 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 CELA2BP08218 269 aaPredicted RBP8.05□□□□□ -1.12
NEK3-201ENST00000550331 CCNYL3P0C7X3 344 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 TRIM21P19474 475 aaKnown RBP8.05□□□□□ -1.12
NEK3-201ENST00000550331 ASPAP45381 313 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 DHPSP49366 369 aaPredicted RBP8.05□□□□□ -1.12
NEK3-201ENST00000550331 KDSRQ06136 332 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 ENPEPQ07075 957 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 GOLGA8FQ08AF8 430 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 GOLGA8DPQ0D2H9 430 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 MAP7D1Q3KQU3 841 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 UAP1L1Q3KQV9 507 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 LINC01559Q495D7 138 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 PEAR1Q5VY43 1037 aaPredicted RBP8.05□□□□□ -1.12
NEK3-201ENST00000550331 SCARA5Q6ZMJ2 495 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 SV2AQ7L0J3 742 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 ACOT1Q86TX2 421 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 TTC30AQ86WT1 665 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 SYT12Q8IV01 421 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 TERB1Q8NA31 727 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 ZMIZ2Q8NF64 920 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 SLC2A14Q8TDB8 520 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 PAGE5Q96GU1 130 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 SMOQ99835 787 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 KCTD10Q9H3F6 313 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 PNPLA8Q9NP80 782 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 TLR8Q9NR97 1041 aaKnown RBP8.05□□□□□ -1.12
NEK3-201ENST00000550331 SPHK2Q9NRA0 654 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 EXOC1Q9NV70 894 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 GMIPQ9P107 970 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 BCCIPQ9P287 314 aaKnown RBP eCLIP8.05□□□□□ -1.12
NEK3-201ENST00000550331 USP25Q9UHP3 1055 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 SERTAD1Q9UHV2 236 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 RCOR1Q9UKL0 485 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 STARD13Q9Y3M8 1113 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 NEUROG3Q9Y4Z2 214 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 IGSF10Q6WRI0 2623 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 ADAMTS9Q9P2N4 1935 aa8.05□□□□□ -1.12
NEK3-201ENST00000550331 TNRC6BQ9UPQ9 1833 aaKnown RBP8.04□□□□□ -1.12
NEK3-201ENST00000550331 TCRBV21S2A2A0A5A6 115 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 TBC1D3BA6NDS4 549 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 CACNG3O60359 315 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 GREM1O60565 184 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 BEST1O76090 585 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 KIF20AO95235 890 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 HSP90AA1P07900 732 aaKnown RBP8.04□□□□□ -1.12
NEK3-201ENST00000550331 CCDC130P13994 396 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 PIK3CAP42336 1068 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 PTGER3P43115 390 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 NDST1P52848 882 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 MAP3K7CLP57077 242 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 DLG4P78352 724 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 IRX4P78413 519 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 SRSF11Q05519 484 aaKnown RBP8.04□□□□□ -1.12
NEK3-201ENST00000550331 INCA1Q0VD86 236 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 NFIL3Q16649 462 aa8.04□□□□□ -1.12
NEK3-201ENST00000550331 ANO4Q32M45 955 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms