RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 SPG21Q9NZD8 308 aa9.53□□□□□ -0.88
PPFIA2-216ENST00000549396 A0A087X0T9 212 aa9.53□□□□□ -0.88
PPFIA2-216ENST00000549396 SUPT3HB4E1H0 165 aa9.53□□□□□ -0.88
PPFIA2-216ENST00000549396 H3BQF6 201 aa9.53□□□□□ -0.88
PPFIA2-216ENST00000549396 CYP1A2P05177 515 aa9.53□□□□□ -0.88
PPFIA2-216ENST00000549396 FAM228BP0C875 321 aa9.53□□□□□ -0.88
PPFIA2-216ENST00000549396 ZNF7P17097 686 aaPredicted RBP9.53□□□□□ -0.88
PPFIA2-216ENST00000549396 CYP2A7P20853 494 aa9.53□□□□□ -0.88
PPFIA2-216ENST00000549396 MDH1P40925 334 aaKnown RBP9.53□□□□□ -0.88
PPFIA2-216ENST00000549396 HK2P52789 917 aa9.53□□□□□ -0.88
PPFIA2-216ENST00000549396 CCDC153Q494R4 210 aa9.53□□□□□ -0.88
PPFIA2-216ENST00000549396 EFR3BQ9Y2G0 817 aa9.53□□□□□ -0.88
PPFIA2-216ENST00000549396 C1QTNF3-AMACRE9PGA6 284 aa9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 APOC4-APOC2K7ER74 178 aa9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 XPO1O14980 1071 aaKnown RBP9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 PMM2O15305 246 aa9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 DIAPH2O60879 1101 aa9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 SRP72O76094 671 aaKnown RBP9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 APOC2P02655 101 aa9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 CDK7P50613 346 aa9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 FAM46CQ5VWP2 391 aa9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 KSR1Q8IVT5 923 aa9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 PIK3R5Q8WYR1 880 aa9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 SH2D3AQ9BRG2 576 aa9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 CDT1Q9H211 546 aa9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 L2HGDHQ9H9P8 463 aa9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 NOP53Q9NZM5 478 aaKnown RBP9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 DDX20Q9UHI6 824 aaKnown RBP9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 SCOCQ9UIL1 159 aa9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 ZNF541Q9H0D2 1346 aa9.52□□□□□ -0.88
PPFIA2-216ENST00000549396 EML1O00423 815 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 RAD51CO43502 376 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 DARSP14868 501 aaKnown RBP9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 STX5Q13190 355 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 PTPN21Q16825 1174 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 RARS2Q5T160 578 aaKnown RBP9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 FAM117BQ6P1L5 589 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 SLC26A11Q86WA9 606 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 ST13P4Q8IZP2 240 aaPredicted RBP9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 WDR24Q96S15 920 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 ZDHHC4Q9NPG8 344 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 ADAM28Q9UKQ2 775 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 BTBD19C9JJ37 291 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 MYL4P12829 197 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 SERPINA4P29622 427 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 XRCC4Q13426 336 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 CAPSQ13938 189 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 CAPRIN1Q14444 709 aaKnown RBP9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 INTS6LQ5JSJ4 861 aaKnown RBP9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 RRM2BQ7LG56 351 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 FAM71DQ8N9W8 422 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 CAVIN3Q969G5 261 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 ZNF670Q9BS34 389 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 EPN3Q9H201 632 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 UBA2Q9UBT2 640 aaPredicted RBP9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 VAV3Q9UKW4 847 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 MAFBQ9Y5Q3 323 aaPredicted RBP9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 LAMB4A4D0S4 1761 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 A0A088AWK7 358 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 WDR91A4D1P6 747 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 CASTOR2A6NHX0 329 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 IFRD1O00458 451 aaPredicted RBP9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 PPP1R37O75864 691 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 IFNA14P01570 189 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 ZNF10P21506 573 aaPredicted RBP9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 INPP1P49441 399 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 POU4F1Q01851 419 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 PARP6Q2NL67 630 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 ANGPTL8Q6UXH0 198 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 USP45Q70EL2 814 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 SLC24A5Q71RS6 500 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 WDR41Q9HAD4 459 aa9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 RBM12Q9NTZ6 932 aaKnown RBP9.52□□□□□ -0.89
PPFIA2-216ENST00000549396 MAP3K13O43283 966 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 E2F6O75461 281 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 OR56A5P0C7T3 313 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 POLR2EP19388 210 aaKnown RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 PSMA3P25788 255 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 ZNF143P52747 638 aaPredicted RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 PSMC6P62333 389 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 OTUD4Q01804 1114 aaKnown RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 SPDYE7PQ495Y7 208 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 PAN2Q504Q3 1202 aaKnown RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 ZNF571Q7Z3V5 609 aaPredicted RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 NUP93Q8N1F7 819 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 USP33Q8TEY7 942 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 MTMR8Q96EF0 704 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 DUSP9Q99956 384 aaKnown RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 TACO1Q9BSH4 297 aaKnown RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 POLR1EQ9GZS1 481 aaKnown RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 RAD21L1Q9H4I0 556 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 WWOXQ9NZC7 414 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 VTI1BQ9UEU0 232 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 FAM153AQ9UHL3 310 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 HOXB6P17509 224 aaKnown RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 KCNK10P57789 538 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 HPCAP84074 193 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 TBX2Q13207 712 aaPredicted RBP9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 STRADAQ7RTN6 431 aa9.51□□□□□ -0.89
PPFIA2-216ENST00000549396 FAM71AQ8IYT1 594 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms