RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 KBTBD12Q3ZCT8 623 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 NME8Q8N427 588 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 FAF2Q96CS3 445 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 FAM161BQ96MY7 647 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 KATNAL1Q9BW62 490 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 AP5M1Q9H0R1 490 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 UPF3AQ9H1J1 476 aaKnown RBP11.51□□□□□ -0.57
LINC00661-204ENST00000549354 CYP3A43Q9HB55 503 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 ITGA11Q9UKX5 1188 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 TCRBV5S1A1TA0A578 114 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 TNPO2O14787 897 aaKnown RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 NVLO15381 856 aaKnown RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 KCNN4O15554 427 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 LPXNO60711 386 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 MYL2P10916 166 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 MMP8P22894 467 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 SARNPP82979 210 aaKnown RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 ZNF252P-AS1Q0IIN9 211 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 ZBTB6Q15916 424 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 CCDC142Q17RM4 750 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 TSNAXIP1Q2TAA8 658 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 ZC3H12AQ5D1E8 599 aaKnown RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 ALKAL1Q6UXT8 129 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 RINLQ6ZS11 566 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 SCUBE3Q8IX30 993 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 BBOF1Q8ND07 529 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 TRPV1Q8NER1 839 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 EXD1Q8NHP7 514 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 SCG3Q8WXD2 468 aaKnown RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 TWNKQ96RR1 684 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 TSC22D3Q99576 134 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 TSSK1BQ9BXA7 367 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 TMEM120AQ9BXJ8 343 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 PCMTD2Q9NV79 361 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 PARVAQ9NVD7 372 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 EURLQ9NYK6 297 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 KANSL3Q9P2N6 904 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 ARHGAP42A6NI28 874 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 CLGNO14967 610 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 DUSP11O75319 330 aaKnown RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 STK10O94804 968 aaKnown RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 TMEM63AO94886 807 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 ITGB3P05106 788 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 INHBAP08476 426 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 CHRM1P11229 460 aaPredicted RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 EIF4BP23588 611 aaKnown RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 GEMIN4P57678 1058 aaKnown RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 PURAQ00577 322 aaKnown RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 IFRD2Q12894 506 aaPredicted RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 SYDE1Q6ZW31 735 aaPredicted RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 PRPF39Q86UA1 669 aaKnown RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 ARID3BQ8IVW6 561 aaPredicted RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 PHC3Q8NDX5 983 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 NRG4Q8WWG1 115 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 STMN2Q93045 179 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 TSPAN18Q96SJ8 248 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 ADPGKQ9BRR6 497 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 FAM49AQ9H0Q0 323 aaPredicted RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 LHX5Q9H2C1 402 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 CDHR5Q9HBB8 845 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 CACNG4Q9UBN1 327 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 FIS1Q9Y3D6 152 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 E5RJQ4 531 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 USP12O75317 370 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 TBX10O75333 385 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 CYP2C9P11712 490 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 CYBAP13498 195 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 AKR1A1P14550 325 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 AMPD1P23109 780 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 PTPN4P29074 926 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 GJA9P57773 515 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 SESN2P58004 480 aaPredicted RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 KIZQ2M2Z5 673 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 PTPN20Q4JDL3 420 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 SLC27A1Q6PCB7 646 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 C4orf50Q6ZRC1 276 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 CCNJLQ8IV13 435 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 KATNAL2Q8IYT4 538 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 ALLCQ8N6M5 410 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 CFAP61Q8NHU2 1237 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 LENG1Q96BZ8 264 aaPredicted RBP11.5□□□□□ -0.57
LINC00661-204ENST00000549354 CPXM1Q96SM3 734 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 TRIM55Q9BYV6 548 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 AK5Q9Y6K8 562 aa11.5□□□□□ -0.57
LINC00661-204ENST00000549354 KBTBD13C9JR72 458 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 PSTPIP1O43586 416 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 TYROBPO43914 113 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 USP1O94782 785 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 RPL22P35268 128 aaKnown RBP11.49□□□□□ -0.57
LINC00661-204ENST00000549354 SOX11P35716 441 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 TMPRSS15P98073 1019 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 KLC1Q07866 573 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 KRT81Q14533 505 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 TMEM132DQ14C87 1099 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 FSCN1Q16658 493 aaKnown RBP11.49□□□□□ -0.57
LINC00661-204ENST00000549354 ZNF667Q5HYK9 610 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 TEKT4Q8WW24 435 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 SERAC1Q96JX3 654 aa11.49□□□□□ -0.57
LINC00661-204ENST00000549354 TMPRSS4Q9NRS4 437 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms