RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 TMPRSS6Q8IU80 811 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 CCDC65Q8IXS2 484 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 RBBP8NLQ8NC74 664 aaPredicted RBP14.28□□□□□ -0.12
CDX2-202ENST00000548877 LSM14AQ8ND56 463 aaKnown RBP14.28□□□□□ -0.12
CDX2-202ENST00000548877 ZNF507Q8TCN5 953 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 RHBDD1Q8TEB9 315 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 TMEM131Q92545 1883 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 SYAP1Q96A49 352 aaPredicted RBP14.28□□□□□ -0.12
CDX2-202ENST00000548877 P2RY11Q96G91 374 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 SMOQ99835 787 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 NUP58Q9BVL2 599 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 PAPSS1O43252 624 aaPredicted RBP14.27□□□□□ -0.13
CDX2-202ENST00000548877 TGFB1I1O43294 461 aa14.27□□□□□ -0.13
CDX2-202ENST00000548877 PCDHGA12O60330 932 aa14.27□□□□□ -0.13
CDX2-202ENST00000548877 TBX18O95935 607 aa14.27□□□□□ -0.13
CDX2-202ENST00000548877 DLATP10515 647 aaKnown RBP14.27□□□□□ -0.13
CDX2-202ENST00000548877 IL12RB1P42701 662 aa14.27□□□□□ -0.13
CDX2-202ENST00000548877 MFAP3P55082 362 aa14.27□□□□□ -0.13
CDX2-202ENST00000548877 SIPA1Q96FS4 1042 aa14.27□□□□□ -0.13
CDX2-202ENST00000548877 MIR1-1HGQ9H1L0 117 aa14.27□□□□□ -0.13
CDX2-202ENST00000548877 OSER1Q9NX31 292 aa14.27□□□□□ -0.13
CDX2-202ENST00000548877 NXF1Q9UBU9 619 aaKnown RBP14.27□□□□□ -0.13
CDX2-202ENST00000548877 EIF2B4Q9UI10 523 aaKnown RBP14.27□□□□□ -0.13
CDX2-202ENST00000548877 SCML2Q9UQR0 700 aa14.27□□□□□ -0.13
CDX2-202ENST00000548877 CLIC4Q9Y696 253 aa14.27□□□□□ -0.13
CDX2-202ENST00000548877 NUMA1Q14980 2115 aa14.27□□□□□ -0.13
CDX2-202ENST00000548877 COL5A1P20908 1838 aaPredicted RBP14.27□□□□□ -0.13
CDX2-202ENST00000548877 A0A087X0B3 334 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 AP1G2O75843 785 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 BEST1O76090 585 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 PLA2G4AP47712 749 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 AFF3P51826 1226 aaKnown RBP14.26□□□□□ -0.13
CDX2-202ENST00000548877 COPAP53621 1224 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 CDH8P55286 799 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 TRPC3Q13507 836 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 BMT2Q1RMZ1 405 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 FYB2Q5VWT5 728 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 CRYBG2Q8N1P7 616 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 PRCCQ92733 491 aaPredicted RBP14.26□□□□□ -0.13
CDX2-202ENST00000548877 ERLEC1Q96DZ1 483 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 PIWIL1Q96J94 861 aaKnown RBP14.26□□□□□ -0.13
CDX2-202ENST00000548877 CLIC6Q96NY7 704 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 MED10Q9BTT4 135 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 SMYD3Q9H7B4 428 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 AGPAT3Q9NRZ7 376 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 KRT82Q9NSB4 513 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 SMC3Q9UQE7 1217 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 BTBD3Q9Y2F9 522 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 ZNF510Q9Y2H8 683 aa14.26□□□□□ -0.13
CDX2-202ENST00000548877 PTPRQQ9UMZ3 2332 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 A0A1B0GVT2 93 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 GOLGA6L22H0YM25 854 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 ATXN7O15265 892 aaPredicted RBP14.25□□□□□ -0.13
CDX2-202ENST00000548877 C1QL1O75973 258 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 ZIC2O95409 532 aaPredicted RBP14.25□□□□□ -0.13
CDX2-202ENST00000548877 STAT6P42226 847 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 GRK6P43250 576 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 CLDN10P78369 228 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 ORC1Q13415 861 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 EIF4HQ15056 248 aaKnown RBP14.25□□□□□ -0.13
CDX2-202ENST00000548877 GEN1Q17RS7 908 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 CNNM4Q6P4Q7 775 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 TMPRSS12Q86WS5 348 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 MARCH9Q86YJ5 346 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 C12orf56Q8IXR9 622 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 XXYLT1Q8NBI6 393 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 RDH13Q8NBN7 331 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 UCMAQ8WVF2 138 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 IGSF8Q969P0 613 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 CCDC127Q96BQ5 260 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 CRELD1Q96HD1 420 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 SDCBP2Q9H190 292 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 PRORYQ9H606 182 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 PNPLA8Q9NP80 782 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.25□□□□□ -0.13
CDX2-202ENST00000548877 DNMT3LQ9UJW3 386 aa14.25□□□□□ -0.13
CDX2-202ENST00000548877 UBE4BO95155 1302 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 HHLA1C9JL84 531 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 SYNCRIPO60506 623 aaKnown RBP14.24□□□□□ -0.13
CDX2-202ENST00000548877 STC2O76061 302 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 KLKB1P03952 638 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 CHKAP35790 457 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 ABCG1P45844 678 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 GRIA4P48058 902 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 CSNK1EP49674 416 aaKnown RBP14.24□□□□□ -0.13
CDX2-202ENST00000548877 AP3M2P53677 418 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 KIF19Q2TAC6 998 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 ZNF667Q5HYK9 610 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 CLEC17AQ6ZS10 378 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 ACOT1Q86TX2 421 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 UNC93AQ86WB7 457 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 SLC39A7Q92504 469 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 HPS3Q969F9 1004 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 LRRC27Q9C0I9 530 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 TNMDQ9H2S6 317 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 NMUR1Q9HB89 426 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 FOXD4L1Q9NU39 408 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 KBTBD4Q9NVX7 518 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 ELOVL2Q9NXB9 296 aa14.24□□□□□ -0.13
CDX2-202ENST00000548877 PLK2Q9NYY3 685 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms