RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 SRSF5Q13243 272 aaKnown RBP16.49■□□□□ 0.23
DDX54-205ENST00000548786 FBXO43Q4G163 708 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 TAF3Q5VWG9 929 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 CCDC33Q8N5R6 958 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 C1orf131Q8NDD1 294 aaKnown RBP16.49■□□□□ 0.23
DDX54-205ENST00000548786 ANKRD20A12PQ8NF67 263 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 ADAM32Q8TC27 787 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 IRGQQ8WZA9 623 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 P2RY11Q96G91 374 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 DNAJC17Q9NVM6 304 aaKnown RBP16.49■□□□□ 0.23
DDX54-205ENST00000548786 SLC8A2Q9UPR5 921 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 KIAA1549LQ6ZVL6 1849 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 SYCE3A1L190 88 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 TBC1D3BA6NDS4 549 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 PROB1E7EW31 1015 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 EPHB6O15197 1021 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 HOXC11O43248 304 aaPredicted RBP16.48■□□□□ 0.23
DDX54-205ENST00000548786 PAPSS1O43252 624 aaPredicted RBP16.48■□□□□ 0.23
DDX54-205ENST00000548786 ATP1A3P13637 1013 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 KRT9P35527 623 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 TIE1P35590 1138 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 NCAPHQ15003 741 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 LPAL2Q16609 132 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 EMC10Q5UCC4 262 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 ETFBKMTQ8IXQ9 262 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 FAM71AQ8IYT1 594 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 WDTC1Q8N5D0 677 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 PLD4Q96BZ4 506 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 ERLEC1Q96DZ1 483 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 PIWIL1Q96J94 861 aaKnown RBP16.48■□□□□ 0.23
DDX54-205ENST00000548786 NAA15Q9BXJ9 866 aaKnown RBP16.48■□□□□ 0.23
DDX54-205ENST00000548786 SLC4A5Q9BY07 1137 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 GANQ9H2C0 597 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 HSD3B7Q9H2F3 369 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 PDCL3Q9H2J4 239 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 NLRC4Q9NPP4 1024 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 DEC1Q9P2X7 70 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 NAALADL1Q9UQQ1 740 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 PCDHGA2Q9Y5H1 932 aa16.48■□□□□ 0.23
DDX54-205ENST00000548786 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.47■□□□□ 0.23
DDX54-205ENST00000548786 F8VZ95 297 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 TSPAN3O60637 253 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 ATG13O75143 517 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 GRIA2P42262 883 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 ACADSBP45954 432 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 HARS2P49590 506 aaKnown RBP16.47■□□□□ 0.23
DDX54-205ENST00000548786 POLR2FP61218 127 aaKnown RBP16.47■□□□□ 0.23
DDX54-205ENST00000548786 UBXN1Q04323 297 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 DMC1Q14565 340 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 SYCP1Q15431 976 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 TAF5Q15542 800 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 C10orf76Q5T2E6 689 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 GRAMD4Q6IC98 578 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 MAMSTRQ6ZN01 415 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 TOGARAM2Q6ZUX3 1019 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 SCML4Q8N228 414 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 PHTF2Q8N3S3 785 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 ALLCQ8N6M5 410 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 ZBTB44Q8NCP5 570 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 USP33Q8TEY7 942 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 PPP1R13BQ96KQ4 1090 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 CPXM1Q96SM3 734 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 HINFPQ9BQA5 517 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 DCLK3Q9C098 648 aa16.47■□□□□ 0.23
DDX54-205ENST00000548786 NAT10Q9H0A0 1025 aaKnown RBP16.47■□□□□ 0.23
DDX54-205ENST00000548786 LIMA1Q9UHB6 759 aaKnown RBP16.47■□□□□ 0.23
DDX54-205ENST00000548786 FANCMQ8IYD8 2048 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 LGALS16A8MUM7 142 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 CAPN9O14815 690 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 GRAP2O75791 330 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 GFPT2O94808 682 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 KLF8O95600 359 aaPredicted RBP16.46■□□□□ 0.23
DDX54-205ENST00000548786 LMNAP02545 664 aaKnown RBP16.46■□□□□ 0.23
DDX54-205ENST00000548786 FYNP06241 537 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 CYP11B1P15538 503 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 ZNF18P17022 549 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 EIF2DP41214 584 aaKnown RBP16.46■□□□□ 0.23
DDX54-205ENST00000548786 RPL34P49207 117 aaKnown RBP16.46■□□□□ 0.23
DDX54-205ENST00000548786 NRLP54845 237 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 TRIP4Q15650 581 aaPredicted RBP16.46■□□□□ 0.23
DDX54-205ENST00000548786 SYPL2Q5VXT5 272 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 PRR23BQ6ZRT6 265 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 DHX40Q8IX18 779 aaKnown RBP16.46■□□□□ 0.23
DDX54-205ENST00000548786 DQX1Q8TE96 717 aaKnown RBP16.46■□□□□ 0.23
DDX54-205ENST00000548786 STK32AQ8WU08 396 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 NELL1Q92832 810 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 ACDQ96AP0 544 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 XPO6Q96QU8 1125 aaKnown RBP16.46■□□□□ 0.23
DDX54-205ENST00000548786 STK33Q9BYT3 514 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 SYNCQ9H7C4 482 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 WDR35Q9P2L0 1181 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 PCDHGC3Q9UN70 934 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 ZNF510Q9Y2H8 683 aa16.46■□□□□ 0.23
DDX54-205ENST00000548786 HBS1LQ9Y450 684 aaKnown RBP16.46■□□□□ 0.23
DDX54-205ENST00000548786 SYNJ2BP-COX16A0A087WUM0 186 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 SART1O43290 800 aaKnown RBP16.45■□□□□ 0.22
DDX54-205ENST00000548786 CACNG3O60359 315 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 PAPSS2O95340 614 aaPredicted RBP16.45■□□□□ 0.22
DDX54-205ENST00000548786 ERBB2P04626 1255 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 WASP42768 502 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms