RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 PENKP01210 267 aaPredicted RBP18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 DGKGP49619 791 aa18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 FKBP3Q00688 224 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 EFEMP1Q12805 493 aa18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 CUL2Q13617 745 aa18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 GOLGA7BQ2TAP0 167 aa18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 ANKRD40Q6AI12 368 aa18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 BHLHA9Q7RTU4 235 aa18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 CHPFQ8IZ52 775 aa18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 PGBD3Q8N328 593 aa18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 UBR7Q8N806 425 aa18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 ANKRD52Q8NB46 1076 aa18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 PLK2Q9NYY3 685 aa18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 EVLQ9UI08 416 aaPredicted RBP18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 FBXO10Q9UK96 956 aa18.26■□□□□ 0.51
CHMP1A-205ENST00000548650 ATXN2Q99700 1313 aaKnown RBP18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 ADAMTS9Q9P2N4 1935 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 TULP2O00295 520 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 MAP3K13O43283 966 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 NDUFV2P19404 249 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 CORO1AP31146 461 aaKnown RBP18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 TKTL1P51854 596 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 BCAT1P54687 386 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 COG7P83436 770 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 LRRC63Q05C16 580 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 BYSLQ13895 437 aaKnown RBP18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 SPDYCQ5MJ68 293 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 FYB2Q5VWT5 728 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 PEAR1Q5VY43 1037 aaPredicted RBP18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 LYSMD4Q5XG99 296 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 KIAA1211LQ6NV74 962 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 ARHGAP18Q8N392 663 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 IPO4Q8TEX9 1081 aaKnown RBP18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 TMEM9BQ9NQ34 198 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 TMEM74BQ9NUR3 256 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 TSPAN16Q9UKR8 245 aa18.25■□□□□ 0.51
CHMP1A-205ENST00000548650 CDX4O14627 284 aaPredicted RBP18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 SMC2O95347 1197 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 HMBSP08397 361 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 YWHAGP61981 247 aaKnown RBP eCLIP18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 IRX4P78413 519 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 PDE4CQ08493 712 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 TRIM61Q5EBN2 209 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 PM20D1Q6GTS8 502 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 PSAPL1Q6NUJ1 521 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 SYT12Q8IV01 421 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 SMARCE1Q969G3 411 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 ULBP1Q9BZM6 244 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 CACNA2D2Q9NY47 1150 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 MARCH2Q9P0N8 246 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 ARMCX3Q9UH62 379 aaPredicted RBP18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 AGO1Q9UL18 857 aaKnown RBP18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 ZNF510Q9Y2H8 683 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 SLC27A6Q9Y2P4 619 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 RAD54BQ9Y620 910 aa18.24■□□□□ 0.51
CHMP1A-205ENST00000548650 IGHV1OR15-9A0A0B4J2B8 117 aa18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 GOLGA6L4A6NEF3 574 aa18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 XPO1O14980 1071 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 ZBED1O96006 694 aa18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 ITPKAP23677 461 aa18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 NOVA1P51513 510 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 MFAP3P55082 362 aa18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 DAB2IPQ5VWQ8 1189 aa18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 RSRC2Q7L4I2 434 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 FAM217AQ8IXS0 508 aa18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 ERLEC1Q96DZ1 483 aa18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 TIGD1Q96MW7 591 aa18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 DCLK3Q9C098 648 aa18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 PILRBQ9UKJ0 227 aa18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 ANGPTL2Q9UKU9 493 aa18.23■□□□□ 0.51
CHMP1A-205ENST00000548650 CACNA1EQ15878 2313 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 O00370 1275 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 GFRA2O00451 464 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 AP5Z1O43299 807 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 CD19P15391 556 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 HOXD12P35452 270 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 CHKAP35790 457 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 DPP6P42658 865 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 SLC8A3P57103 927 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 SHC2P98077 582 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 RPL6Q02878 288 aaKnown RBP18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 ADIGQ0VDE8 80 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 BST2Q10589 180 aaKnown RBP18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 GEN1Q17RS7 908 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 SGO2Q562F6 1265 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 SDE2Q6IQ49 451 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 SLC36A4Q6YBV0 504 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 DENND1CQ8IV53 801 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 NDRG1Q92597 394 aaKnown RBP18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 PLD4Q96BZ4 506 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 GTPBP4Q9BZE4 634 aaKnown RBP18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 SLC6A17Q9H1V8 727 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 CD93Q9NPY3 652 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 STRIP2Q9ULQ0 834 aa18.22■□□□□ 0.51
CHMP1A-205ENST00000548650 SLC12A8A0AV02 714 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 PSMA7O14818 248 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 GIPC1O14908 333 aa18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 CD44P16070 742 aaKnown RBP18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 TBXAS1P24557 533 aaPredicted RBP18.21■□□□□ 0.51
CHMP1A-205ENST00000548650 FMO5P49326 533 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms