RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 GAREM2Q75VX8 874 aa29.97■■■□□ 2.39
BRF1-213ENST00000548421 POLNQ7Z5Q5 900 aa29.97■■■□□ 2.39
BRF1-213ENST00000548421 CMASQ8NFW8 434 aaPredicted RBP29.97■■■□□ 2.39
BRF1-213ENST00000548421 TMEM51Q9NW97 253 aa29.97■■■□□ 2.39
BRF1-213ENST00000548421 DNMT3BQ9UBC3 853 aaKnown RBP29.97■■■□□ 2.39
BRF1-213ENST00000548421 PCSK1NQ9UHG2 260 aa29.97■■■□□ 2.39
BRF1-213ENST00000548421 SFMBT1Q9UHJ3 866 aa29.97■■■□□ 2.39
BRF1-213ENST00000548421 MTCH2Q9Y6C9 303 aa29.97■■■□□ 2.39
BRF1-213ENST00000548421 IRAK2O43187 625 aa29.96■■■□□ 2.39
BRF1-213ENST00000548421 GLP2RO95838 553 aa29.96■■■□□ 2.39
BRF1-213ENST00000548421 KRT7P08729 469 aa29.96■■■□□ 2.39
BRF1-213ENST00000548421 MYL4P12829 197 aa29.96■■■□□ 2.39
BRF1-213ENST00000548421 POU3F3P20264 500 aaPredicted RBP29.96■■■□□ 2.39
BRF1-213ENST00000548421 MARCKSL1P49006 195 aa29.96■■■□□ 2.39
BRF1-213ENST00000548421 EFEMP1Q12805 493 aa29.96■■■□□ 2.39
BRF1-213ENST00000548421 SND1Q7KZF4 910 aaKnown RBP eCLIP29.96■■■□□ 2.39
BRF1-213ENST00000548421 LRCH3Q96II8 777 aa29.96■■■□□ 2.39
BRF1-213ENST00000548421 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.96■■■□□ 2.39
BRF1-213ENST00000548421 SNX12Q9UMY4 172 aa29.96■■■□□ 2.39
BRF1-213ENST00000548421 REV3LO60673 3130 aa29.96■■■□□ 2.39
BRF1-213ENST00000548421 TBX18O95935 607 aa29.95■■■□□ 2.39
BRF1-213ENST00000548421 IL1R2P27930 398 aa29.95■■■□□ 2.39
BRF1-213ENST00000548421 GJC1P36383 396 aa29.95■■■□□ 2.39
BRF1-213ENST00000548421 EIF4EBP2Q13542 120 aaPredicted RBP29.95■■■□□ 2.39
BRF1-213ENST00000548421 KLHDC10Q6PID8 442 aa29.95■■■□□ 2.39
BRF1-213ENST00000548421 PDZD4Q76G19 769 aaPredicted RBP29.95■■■□□ 2.39
BRF1-213ENST00000548421 MRPS31Q92665 395 aaKnown RBP29.95■■■□□ 2.39
BRF1-213ENST00000548421 PEBP4Q96S96 227 aa29.95■■■□□ 2.39
BRF1-213ENST00000548421 ZWILCHQ9H900 591 aa29.95■■■□□ 2.39
BRF1-213ENST00000548421 WDR6Q9NNW5 1121 aaKnown RBP29.95■■■□□ 2.39
BRF1-213ENST00000548421 MARCH2Q9P0N8 246 aa29.95■■■□□ 2.39
BRF1-213ENST00000548421 NOTCH4Q99466 2003 aa29.95■■■□□ 2.39
BRF1-213ENST00000548421 C2orf16Q68DN1 1984 aa29.94■■■□□ 2.38
BRF1-213ENST00000548421 OAS1P00973 400 aaKnown RBP29.94■■■□□ 2.38
BRF1-213ENST00000548421 RHOP08100 348 aa29.94■■■□□ 2.38
BRF1-213ENST00000548421 ATP5C1P36542 298 aaKnown RBP29.94■■■□□ 2.38
BRF1-213ENST00000548421 PEX5P50542 639 aa29.94■■■□□ 2.38
BRF1-213ENST00000548421 NNTQ13423 1086 aa29.94■■■□□ 2.38
BRF1-213ENST00000548421 FAM131BQ86XD5 332 aa29.94■■■□□ 2.38
BRF1-213ENST00000548421 C12orf76Q8N812 135 aaPredicted RBP29.94■■■□□ 2.38
BRF1-213ENST00000548421 SMG7Q92540 1137 aaKnown RBP29.94■■■□□ 2.38
BRF1-213ENST00000548421 NACA2Q9H009 215 aa29.94■■■□□ 2.38
BRF1-213ENST00000548421 ATXN3LQ9H3M9 355 aa29.94■■■□□ 2.38
BRF1-213ENST00000548421 PIDD1Q9HB75 910 aa29.94■■■□□ 2.38
BRF1-213ENST00000548421 RASAL2Q9UJF2 1139 aa29.94■■■□□ 2.38
BRF1-213ENST00000548421 DNMT3LQ9UJW3 386 aa29.94■■■□□ 2.38
BRF1-213ENST00000548421 SZT2Q5T011 3432 aa29.94■■■□□ 2.38
BRF1-213ENST00000548421 MSI1O43347 362 aaKnown RBP29.93■■■□□ 2.38
BRF1-213ENST00000548421 CXCR3P49682 368 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 RWDD2BP57060 319 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 ADGRE1Q14246 886 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 TXNRD3NBQ6F5E7 133 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 CYP4V2Q6ZWL3 525 aaPredicted RBP29.93■■■□□ 2.38
BRF1-213ENST00000548421 ALG3Q92685 438 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 PSMB7Q99436 277 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 SAR1BQ9Y6B6 198 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 A0A1W2PRU2 124 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 C2orf78A6NCI8 922 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 KCNK3O14649 394 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 MDM4O15151 490 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 LINC01565O15544 149 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 COCHO43405 550 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 PRLRP16471 622 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 AMPD2Q01433 879 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 SMTNL2Q2TAL5 461 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 BOLA3Q53S33 107 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 TMC5Q6UXY8 1006 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 GRASPQ7Z6J2 395 aaPredicted RBP29.93■■■□□ 2.38
BRF1-213ENST00000548421 KATNAL2Q8IYT4 538 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 OSBPL9Q96SU4 736 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 DDX56Q9NY93 547 aaKnown RBP29.93■■■□□ 2.38
BRF1-213ENST00000548421 TLR6Q9Y2C9 796 aa29.93■■■□□ 2.38
BRF1-213ENST00000548421 TCP1P17987 556 aaKnown RBP29.92■■■□□ 2.38
BRF1-213ENST00000548421 CCR2P41597 374 aa29.92■■■□□ 2.38
BRF1-213ENST00000548421 CYP4F8P98187 520 aa29.92■■■□□ 2.38
BRF1-213ENST00000548421 ADAM15Q13444 863 aa29.92■■■□□ 2.38
BRF1-213ENST00000548421 ANKRD54Q6NXT1 300 aa29.92■■■□□ 2.38
BRF1-213ENST00000548421 MIB1Q86YT6 1006 aa29.92■■■□□ 2.38
BRF1-213ENST00000548421 TEKT4Q8WW24 435 aa29.92■■■□□ 2.38
BRF1-213ENST00000548421 TRPC7Q9HCX4 862 aa29.92■■■□□ 2.38
BRF1-213ENST00000548421 RARAP10276 462 aa29.91■■■□□ 2.38
BRF1-213ENST00000548421 IGFBP4P22692 258 aa29.91■■■□□ 2.38
BRF1-213ENST00000548421 KPNA1P52294 538 aaPredicted RBP29.91■■■□□ 2.38
BRF1-213ENST00000548421 AIF1P55008 147 aa29.91■■■□□ 2.38
BRF1-213ENST00000548421 TRIP4Q15650 581 aaPredicted RBP29.91■■■□□ 2.38
BRF1-213ENST00000548421 ATP13A4Q4VNC1 1196 aa29.91■■■□□ 2.38
BRF1-213ENST00000548421 KCNT1Q5JUK3 1230 aa29.91■■■□□ 2.38
BRF1-213ENST00000548421 ZFYVE27Q5T4F4 411 aa29.91■■■□□ 2.38
BRF1-213ENST00000548421 ERMARDQ5T6L9 678 aa29.91■■■□□ 2.38
BRF1-213ENST00000548421 CCDC185Q8N715 623 aa29.91■■■□□ 2.38
BRF1-213ENST00000548421 SHKBP1Q8TBC3 707 aa29.91■■■□□ 2.38
BRF1-213ENST00000548421 RNF34Q969K3 372 aa29.91■■■□□ 2.38
BRF1-213ENST00000548421 NTAN1Q96AB6 310 aa29.91■■■□□ 2.38
BRF1-213ENST00000548421 FAM161BQ96MY7 647 aa29.91■■■□□ 2.38
BRF1-213ENST00000548421 GAS2L1Q99501 681 aaPredicted RBP29.91■■■□□ 2.38
BRF1-213ENST00000548421 SNRNP25Q9BV90 132 aaKnown RBP29.91■■■□□ 2.38
BRF1-213ENST00000548421 CARD9Q9H257 536 aa29.91■■■□□ 2.38
BRF1-213ENST00000548421 WDCPQ9H6R7 721 aa29.91■■■□□ 2.38
BRF1-213ENST00000548421 RRAGDQ9NQL2 400 aaPredicted RBP29.91■■■□□ 2.38
BRF1-213ENST00000548421 PFKLP17858 780 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms