RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 FYNP06241 537 aa24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 USP8P40818 1118 aa24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 ZNF165P49910 485 aa24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 NRLP54845 237 aa24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 JAM2P57087 298 aa24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 SNX16P57768 344 aa24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 ZNF445P59923 1031 aa24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 HSF5Q4G112 596 aaPredicted RBP24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 TMEM25Q86YD3 366 aa24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 MIB1Q86YT6 1006 aa24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 SCUBE3Q8IX30 993 aa24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 AOPEPQ8N6M6 819 aa24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 DDX1Q92499 740 aaKnown RBP24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 PNKPQ96T60 521 aa24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 ZSCAN32Q9NX65 697 aa24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 RASAL2Q9UJF2 1139 aa24.33■■□□□ 1.49
CTDSP2-203ENST00000547701 FAM186AA6NE01 2351 aa24.32■■□□□ 1.48
CTDSP2-203ENST00000547701 CCDC163A0A0D9SF12 145 aa24.32■■□□□ 1.48
CTDSP2-203ENST00000547701 CHRM1P11229 460 aaPredicted RBP24.32■■□□□ 1.48
CTDSP2-203ENST00000547701 CYP11B1P15538 503 aa24.32■■□□□ 1.48
CTDSP2-203ENST00000547701 CDK11BP21127 795 aaKnown RBP24.32■■□□□ 1.48
CTDSP2-203ENST00000547701 KRT9P35527 623 aa24.32■■□□□ 1.48
CTDSP2-203ENST00000547701 IQCB1Q15051 598 aa24.32■■□□□ 1.48
CTDSP2-203ENST00000547701 Q6ZS52 159 aa24.32■■□□□ 1.48
CTDSP2-203ENST00000547701 ZNF677Q86XU0 584 aa24.32■■□□□ 1.48
CTDSP2-203ENST00000547701 FMNL3Q8IVF7 1028 aa24.32■■□□□ 1.48
CTDSP2-203ENST00000547701 GOLGA1Q92805 767 aa24.32■■□□□ 1.48
CTDSP2-203ENST00000547701 NOX5Q96PH1 765 aa24.32■■□□□ 1.48
CTDSP2-203ENST00000547701 K7EQS6 105 aa24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 K7ESF4 209 aa24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 GFRA2O00451 464 aa24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 IRF1P10914 325 aa24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 GRIA2P42262 883 aa24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 TNFRSF4P43489 277 aa24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 MRPS21P82921 87 aaKnown RBP24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 EIF4EBP2Q13542 120 aaPredicted RBP24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 RAPGEF1Q13905 1077 aa24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 NAIF1Q69YI7 327 aaPredicted RBP24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 CLEC4CQ8WTT0 213 aa24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 ST7Q9NRC1 585 aa24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 AGO1Q9UL18 857 aaKnown RBP24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 STARD13Q9Y3M8 1113 aa24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 USP34Q70CQ2 3546 aa24.31■■□□□ 1.48
CTDSP2-203ENST00000547701 SLC12A8A0AV02 714 aa24.3■■□□□ 1.48
CTDSP2-203ENST00000547701 E5RJQ4 531 aa24.3■■□□□ 1.48
CTDSP2-203ENST00000547701 PENKP01210 267 aaPredicted RBP24.3■■□□□ 1.48
CTDSP2-203ENST00000547701 SCNN1AP37088 669 aa24.3■■□□□ 1.48
CTDSP2-203ENST00000547701 GABRB2P47870 512 aa24.3■■□□□ 1.48
CTDSP2-203ENST00000547701 CSTF1Q05048 431 aaKnown RBP24.3■■□□□ 1.48
CTDSP2-203ENST00000547701 SYT13Q7L8C5 426 aa24.3■■□□□ 1.48
CTDSP2-203ENST00000547701 ZDHHC17Q8IUH5 632 aa24.3■■□□□ 1.48
CTDSP2-203ENST00000547701 EDEM1Q92611 657 aa24.3■■□□□ 1.48
CTDSP2-203ENST00000547701 PPP1R13BQ96KQ4 1090 aa24.3■■□□□ 1.48
CTDSP2-203ENST00000547701 CPXM1Q96SM3 734 aa24.3■■□□□ 1.48
CTDSP2-203ENST00000547701 CEP83Q9Y592 693 aa24.3■■□□□ 1.48
CTDSP2-203ENST00000547701 ZFHX2Q9C0A1 2572 aaPredicted RBP24.3■■□□□ 1.48
CTDSP2-203ENST00000547701 SCAMP3O14828 347 aaKnown RBP24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 RNF40O75150 1001 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 TULP3O75386 442 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 KAT7O95251 611 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 LSM8O95777 96 aaKnown RBP24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 ATP1A3P13637 1013 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 CORO1AP31146 461 aaKnown RBP24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 HARS2P49590 506 aaKnown RBP24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 YWHAZP63104 245 aaKnown RBP24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 SATB1Q01826 763 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 UBXN1Q04323 297 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 SYCP1Q15431 976 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 NUGGCQ68CJ6 796 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 NUDT18Q6ZVK8 323 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 C12orf40Q86WS4 652 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 UNC45BQ8IWX7 931 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 CAMKK1Q8N5S9 505 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 C1orf131Q8NDD1 294 aaKnown RBP24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 ZNF397Q8NF99 534 aaPredicted RBP24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 EPS8L1Q8TE68 723 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 USP33Q8TEY7 942 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 ACDQ96AP0 544 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 XPO6Q96QU8 1125 aaKnown RBP24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 MIS12Q9H081 205 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 POPDC2Q9HBU9 364 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 RTN4Q9NQC3 1192 aaKnown RBP24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 TMEM51Q9NW97 253 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 DEC1Q9P2X7 70 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 OTOGLQ3ZCN5 2332 aa24.29■■□□□ 1.48
CTDSP2-203ENST00000547701 PTPRZ1P23471 2315 aaPredicted RBP24.28■■□□□ 1.48
CTDSP2-203ENST00000547701 IGLV3-25P01717 112 aa24.28■■□□□ 1.48
CTDSP2-203ENST00000547701 APODP05090 189 aa24.28■■□□□ 1.48
CTDSP2-203ENST00000547701 PNMA6AP0CW24 399 aaPredicted RBP24.28■■□□□ 1.48
CTDSP2-203ENST00000547701 SOX5P35711 763 aa24.28■■□□□ 1.48
CTDSP2-203ENST00000547701 SLC6A11P48066 632 aa24.28■■□□□ 1.48
CTDSP2-203ENST00000547701 POLR2FP61218 127 aaKnown RBP24.28■■□□□ 1.48
CTDSP2-203ENST00000547701 EFHC1Q5JVL4 640 aa24.28■■□□□ 1.48
CTDSP2-203ENST00000547701 RNF43Q68DV7 783 aa24.28■■□□□ 1.48
CTDSP2-203ENST00000547701 TMEM35BQ8NCS4 154 aa24.28■■□□□ 1.48
CTDSP2-203ENST00000547701 SLC39A13Q96H72 371 aa24.28■■□□□ 1.48
CTDSP2-203ENST00000547701 SERPINB11Q96P15 392 aa24.28■■□□□ 1.48
CTDSP2-203ENST00000547701 PHOX2BQ99453 314 aa24.28■■□□□ 1.48
CTDSP2-203ENST00000547701 FAM207AQ9NSI2 230 aaPredicted RBP24.28■■□□□ 1.48
CTDSP2-203ENST00000547701 FAM86C1Q9NVL1 165 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms