RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	CDT1	Q9H211	546 aa		13.44	□□□□□ -0.26
BRF1-210	ENST00000547374	PDGFC	Q9NRA1	345 aa		13.44	□□□□□ -0.26
BRF1-210	ENST00000547374	CIT	O14578	2027 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	CCDC189	A1A4V9	331 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	CYP2F1	P24903	491 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	MGAT1	P26572	445 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	EFNA5	P52803	228 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	KBTBD2	Q8IY47	623 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	DEFB107A	Q8IZN7	70 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	GALNT4	Q8N4A0	578 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	RNF157	Q96PX1	679 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	KCNK13	Q9HB14	408 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	PLA2G4C	Q9UP65	541 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	LRCH1	Q9Y2L9	728 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374		A8MXQ7	604 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	TBC1D12	O60347	775 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	PGM3	O95394	542 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	HSPA4L	O95757	839 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	HOXC6	P09630	235 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	IRX1	P78414	480 aa	Predicted RBP	13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	PRKD1	Q15139	912 aa	Predicted RBP	13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	PHC3	Q8NDX5	983 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	ZNF184	Q99676	751 aa	Predicted RBP	13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	LRRC42	Q9Y546	428 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	ARIH2	O95376	493 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	AVPR1A	P37288	418 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	PMF1	Q6P1K2	205 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	USP33	Q8TEY7	942 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	USP13	Q92995	863 aa	Predicted RBP	13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	PCYT2	Q99447	389 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	CNPY3	Q9BT09	278 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	CAB39L	Q9H9S4	337 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	PDLIM7	Q9NR12	457 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	SLC7A8	Q9UHI5	535 aa		13.43	□□□□□ -0.26
BRF1-210	ENST00000547374	TPP1	O14773	563 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	FARP2	O94887	1054 aa	Predicted RBP	13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	MT-CO1	P00395	513 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	APOE	P02649	317 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	ANPEP	P15144	967 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	BAG6	P46379	1132 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	PPP1R15B	Q5SWA1	713 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	MOB2	Q70IA6	237 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	TMPRSS6	Q8IU80	811 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	SPATA6L	Q8N4H0	392 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	AGBL3	Q8NEM8	1001 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	NMD3	Q96D46	503 aa	Known RBP	13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	TUBB6	Q9BUF5	446 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	PLLP	Q9Y342	182 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	P4HA1	P13674	534 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	TMEM132D	Q14C87	1099 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	CCDC142	Q17RM4	750 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	PCDH19	Q8TAB3	1148 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	TAGLN3	Q9UI15	199 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	SYNPO2	Q9UMS6	1093 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	ZNF286B	P0CG31	522 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	CCDC130	P13994	396 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	KIZ	Q2M2Z5	673 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	CTC1	Q2NKJ3	1217 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	DCAF6	Q58WW2	860 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	IER5	Q5VY09	327 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	HPS6	Q86YV9	775 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	CCNYL1	Q8N7R7	359 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	GCNA	Q96QF7	691 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	ZNF518B	Q9C0D4	1074 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	RPS6KL1	Q9Y6S9	549 aa		13.42	□□□□□ -0.26
BRF1-210	ENST00000547374	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	C3orf70	A6NLC5	250 aa	Predicted RBP	13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	NOMO1	Q15155	1222 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	DLG2	Q15700	870 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	RNF135	Q8IUD6	432 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	CDKL2	Q92772	493 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	TEPSIN	Q96N21	525 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	PANX3	Q96QZ0	392 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	NT5C1A	Q9BXI3	368 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	XYLT2	Q9H1B5	865 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	SIX4	Q9UIU6	781 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	CPSF3	Q9UKF6	684 aa	Known RBP	13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	COL24A1	Q17RW2	1714 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	PPEF2	O14830	753 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	ENO3	P13929	434 aa	Predicted RBP	13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	GOT1	P17174	413 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	SLC1A6	P48664	564 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	PKNOX1	P55347	436 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	SATB1	Q01826	763 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	C10orf107	Q8IVU9	208 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	PSAT1	Q9Y617	370 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	TEX264	Q9Y6I9	313 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	ANKRD12	Q6UB98	2062 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374		A0A1B0GVG6	124 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	RARB	P10826	455 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	ARL4A	P40617	200 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	DSG1	Q02413	1049 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	MMEL1	Q495T6	779 aa		13.41	□□□□□ -0.26
BRF1-210	ENST00000547374	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms