RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 IMPDH2P12268 514 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 ADRA1DP25100 572 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 CUL2Q13617 745 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 MXD4Q14582 209 aaPredicted RBP13.16□□□□□ -0.3
PTCH1-212ENST00000546744 CLEC16AQ2KHT3 1053 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 TBC1D10BQ4KMP7 808 aaPredicted RBP13.16□□□□□ -0.3
PTCH1-212ENST00000546744 CACHD1Q5VU97 1274 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 RP9Q8TA86 221 aaKnown RBP13.16□□□□□ -0.3
PTCH1-212ENST00000546744 CASS4Q9NQ75 786 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 GIN1Q9NXP7 522 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 NCAM2O15394 837 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 IFNA14P01570 189 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 FECHP22830 423 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 CRKP46108 304 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 TRAP1Q12931 704 aaKnown RBP13.16□□□□□ -0.3
PTCH1-212ENST00000546744 PDCD4Q53EL6 469 aaKnown RBP13.16□□□□□ -0.3
PTCH1-212ENST00000546744 WDR59Q6PJI9 974 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 PACS1Q6VY07 963 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 ILDR1Q86SU0 546 aaPredicted RBP13.16□□□□□ -0.3
PTCH1-212ENST00000546744 C8orf59Q8N0T1 100 aaPredicted RBP13.16□□□□□ -0.3
PTCH1-212ENST00000546744 OR8H2Q8N162 312 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 SAMD3Q8N6K7 520 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 ENKURQ8TC29 256 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 RASSF5Q8WWW0 418 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 ATXN7L3BQ96GX2 97 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 HES6Q96HZ4 224 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 ZNF302Q9NR11 478 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 KLHL11Q9NVR0 708 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 STOML2Q9UJZ1 356 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 AAR2Q9Y312 384 aaKnown RBP13.16□□□□□ -0.3
PTCH1-212ENST00000546744 CLUHO75153 1309 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 DISP2A7MBM2 1401 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 C5orf58C9J3I9 102 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 MSH3P20585 1137 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 RAP1GAPP47736 663 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 CLCN2P51788 898 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 BNIP2Q12982 314 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 COG2Q14746 738 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 CCDC142Q17RM4 750 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 TAS2R42Q7RTR8 314 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 SNX31Q8N9S9 440 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 E9PBE3 544 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 RAD51BO15315 384 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 CYP2C9P11712 490 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 GYS1P13807 737 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 GCNT1Q02742 428 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 FRG1Q14331 258 aaKnown RBP13.16□□□□□ -0.3
PTCH1-212ENST00000546744 TRIQKQ629K1 86 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 KCNV1Q6PIU1 500 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 ULK2Q8IYT8 1036 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 THEM5Q8N1Q8 247 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 PQLC1Q8N2U9 271 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 RASGEF1CQ8N431 466 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTCH1-212ENST00000546744 PNPT1Q8TCS8 783 aaKnown RBP13.16□□□□□ -0.3
PTCH1-212ENST00000546744 KAT2BQ92831 832 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 SKA1Q96BD8 255 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 CDRT15Q96T59 188 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 GABBR1Q9UBS5 961 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 POLG2Q9UHN1 485 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
PTCH1-212ENST00000546744 UBA6A0AVT1 1052 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-212ENST00000546744 MRASO14807 208 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 GAS2O43903 313 aaKnown RBP13.15□□□□□ -0.3
PTCH1-212ENST00000546744 PSMB9P28065 219 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 FOLH1Q04609 750 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 ACCSLQ4AC99 568 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 PDZK1Q5T2W1 519 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 GPAT2Q6NUI2 795 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 UGT3A1Q6NUS8 523 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 MZT2BQ6NZ67 158 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 TTC23LQ6PF05 361 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 LAYNQ6UX15 382 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 C16orf86Q6ZW13 317 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 ZDHHC13Q8IUH4 622 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 TTC30BQ8N4P2 665 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 SCAIQ8N9R8 606 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 GRPEL2Q8TAA5 225 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 ACTL9Q8TC94 416 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 NLRP4Q96MN2 994 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 TUBGCP5Q96RT8 1024 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 SHCBP1LQ9BZQ2 653 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 ARHGEF3Q9NR81 526 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 OLA1Q9NTK5 396 aaKnown RBP13.15□□□□□ -0.3
PTCH1-212ENST00000546744 PLK2Q9NYY3 685 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 H2AFY2Q9P0M6 372 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-212ENST00000546744 TRIM38O00635 465 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 PPEF1O14829 653 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-212ENST00000546744 GSC2O15499 205 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 TM7SF2O76062 418 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 GDF11O95390 407 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 MPP3Q13368 585 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 DDR2Q16832 855 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 AGKQ53H12 422 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 DSTYKQ6XUX3 929 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 TLCD1Q96CP7 247 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 OTUD5Q96G74 571 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 DNAJC18Q9H819 358 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 ITGA11Q9UKX5 1188 aa13.15□□□□□ -0.3
PTCH1-212ENST00000546744 AP4B1Q9Y6B7 739 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms