RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 MATKP42679 507 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 CACNA2D1P54289 1103 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 HADHQ16836 314 aaKnown RBP9.94□□□□□ -0.82
YBX3-215ENST00000544504 PABPC1LQ4VXU2 614 aaKnown RBP9.94□□□□□ -0.82
YBX3-215ENST00000544504 BTBD8Q5XKL5 378 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 LILRA6Q6PI73 481 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 SYT10Q6XYQ8 523 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 ZNF276Q8N554 614 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 RNF139Q8WU17 664 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 ATRIPQ8WXE1 791 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 RUBCNQ92622 972 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 FBXO32Q969P5 355 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 TRMT2BQ96GJ1 504 aaKnown RBP9.94□□□□□ -0.82
YBX3-215ENST00000544504 HINFPQ9BQA5 517 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 DDX23Q9BUQ8 820 aaKnown RBP9.94□□□□□ -0.82
YBX3-215ENST00000544504 TLR8Q9NR97 1041 aaKnown RBP9.94□□□□□ -0.82
YBX3-215ENST00000544504 ABCC13Q9NSE7 274 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 OLA1Q9NTK5 396 aaKnown RBP9.94□□□□□ -0.82
YBX3-215ENST00000544504 TMEM30AQ9NV96 361 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 CLIC5Q9NZA1 410 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 TJP2Q9UDY2 1190 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 LIMD1Q9UGP4 676 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 USTQ9Y2C2 406 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 SLC27A5Q9Y2P5 690 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 YIPF1Q9Y548 306 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 INSL5Q9Y5Q6 135 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 ACACBO00763 2458 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 ASPMQ8IZT6 3477 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 TMEM110-MUSTN1A8MSY1 372 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 HIDE1A8MVS5 230 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 PIK3R2O00459 728 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 PSTPIP1O43586 416 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 GABBR2O75899 941 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 SEC24AO95486 1093 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 KRT7P08729 469 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 HNRNPA1P09651 372 aaKnown RBP eCLIP9.93□□□□□ -0.82
YBX3-215ENST00000544504 USP17L7P0C7H9 530 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 PRLRP16471 622 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 TCP1P17987 556 aaKnown RBP9.93□□□□□ -0.82
YBX3-215ENST00000544504 SDHBP21912 280 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 GBP1P32455 592 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 PCK1P35558 622 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 CLCN4P51793 760 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 RNASE9P60153 205 aaKnown RBP9.93□□□□□ -0.82
YBX3-215ENST00000544504 YWHAGP61981 247 aaKnown RBP eCLIP9.93□□□□□ -0.82
YBX3-215ENST00000544504 RPL7AP62424 266 aaKnown RBP9.93□□□□□ -0.82
YBX3-215ENST00000544504 MTA1Q13330 715 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 RPS6KA1Q15418 735 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 SLC25A52Q3SY17 297 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 PPM1LQ5SGD2 360 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 MEI1Q5TIA1 1274 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 LRRC38Q5VT99 294 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 BSPRYQ5W0U4 402 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 ZC3H14Q6PJT7 736 aaKnown RBP9.93□□□□□ -0.82
YBX3-215ENST00000544504 SND1Q7KZF4 910 aaKnown RBP eCLIP9.93□□□□□ -0.82
YBX3-215ENST00000544504 STRADAQ7RTN6 431 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 GPRIN1Q7Z2K8 1008 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 PHLDB2Q86SQ0 1253 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 RHOT1Q8IXI2 618 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 TTC9BQ8N6N2 239 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 LEMD2Q8NC56 503 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 STKLD1Q8NE28 680 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 RXFP2Q8WXD0 754 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 MYRFLQ96LU7 910 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 ZNF512Q96ME7 567 aaPredicted RBP9.93□□□□□ -0.82
YBX3-215ENST00000544504 SLC2A13Q96QE2 648 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 IRX2Q9BZI1 471 aaPredicted RBP9.93□□□□□ -0.82
YBX3-215ENST00000544504 CDH22Q9UJ99 828 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 HCFC2Q9Y5Z7 792 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 ALG6Q9Y672 507 aa9.93□□□□□ -0.82
YBX3-215ENST00000544504 FAM170AA1A519 330 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 YJEFN3A6XGL0 299 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 E7ENQ6 273 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 CES2O00748 559 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 CLASP2O75122 1294 aaKnown RBP9.92□□□□□ -0.82
YBX3-215ENST00000544504 XYLBO75191 536 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 C8AP07357 584 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 POU2F2P09086 479 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 ATF6P18850 670 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 COMTP21964 271 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 CTNNA2P26232 953 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 FLT3P36888 993 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 KPNA1P52294 538 aaPredicted RBP9.92□□□□□ -0.82
YBX3-215ENST00000544504 AIF1P55008 147 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 TWF1Q12792 350 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 IFRD2Q12894 506 aaPredicted RBP9.92□□□□□ -0.82
YBX3-215ENST00000544504 TDGQ13569 410 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 ST3GAL2Q16842 350 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 RSPO4Q2I0M5 234 aaPredicted RBP9.92□□□□□ -0.82
YBX3-215ENST00000544504 DCAF6Q58WW2 860 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 ODF2Q5BJF6 829 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 PAPD7Q5XG87 772 aaKnown RBP9.92□□□□□ -0.82
YBX3-215ENST00000544504 CC2D1AQ6P1N0 951 aaPredicted RBP9.92□□□□□ -0.82
YBX3-215ENST00000544504 POLNQ7Z5Q5 900 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 NT5DC3Q86UY8 548 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 DEFB106AQ8N104 65 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 JOSD2Q8TAC2 188 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 SCAMP5Q8TAC9 235 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 SLC7A14Q8TBB6 771 aa9.92□□□□□ -0.82
YBX3-215ENST00000544504 GIPC2Q8TF65 315 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms