RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 DEUP1Q05D60 604 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 NME3Q13232 169 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 PAN2Q504Q3 1202 aaKnown RBP17.7■□□□□ 0.42
PTPRO-209ENST00000543886 FAM26DQ5JW98 314 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 OTUD1Q5VV17 481 aaPredicted RBP17.7■□□□□ 0.42
PTPRO-209ENST00000543886 PYROXD2Q8N2H3 581 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 CNGB3Q9NQW8 809 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 TSC2P49815 1807 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 C5orf60A6NFR6 353 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 H3BRJ5 948 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 TSHRP16473 764 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 DRD4P21917 467 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 AMPD1P23109 780 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 HOXD10P28358 340 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 SSTR1P30872 391 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 ACLYP53396 1101 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 GEMIN4P57678 1058 aaKnown RBP17.69■□□□□ 0.42
PTPRO-209ENST00000543886 DAOAP59103 153 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 PITX1P78337 314 aaPredicted RBP17.69■□□□□ 0.42
PTPRO-209ENST00000543886 TUSC3Q13454 348 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 MTM1Q13496 603 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 QPCTQ16769 361 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 GKAP1Q5VSY0 366 aaPredicted RBP17.69■□□□□ 0.42
PTPRO-209ENST00000543886 SYPL2Q5VXT5 272 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 NCBP2-AS2Q69YL0 99 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 C3orf62Q6ZUJ4 267 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 HFE2Q6ZVN8 426 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 TAX1BP1Q86VP1 789 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 MAML1Q92585 1016 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 UROC1Q96N76 676 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 ZNF317Q96PQ6 595 aaPredicted RBP17.69■□□□□ 0.42
PTPRO-209ENST00000543886 QKIQ96PU8 341 aaKnown RBP eCLIP17.69■□□□□ 0.42
PTPRO-209ENST00000543886 KCNK16Q96T55 309 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 FRMD8Q9BZ67 464 aaPredicted RBP17.69■□□□□ 0.42
PTPRO-209ENST00000543886 PRDM16Q9HAZ2 1276 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 GPBP1L1Q9HC44 474 aaPredicted RBP17.69■□□□□ 0.42
PTPRO-209ENST00000543886 NKIRAS1Q9NYS0 192 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 PSMC3IPQ9P2W1 217 aaPredicted RBP17.69■□□□□ 0.42
PTPRO-209ENST00000543886 SRRDQ9UH36 339 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 DSEQ9UL01 958 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 USP3Q9Y6I4 520 aa17.69■□□□□ 0.42
PTPRO-209ENST00000543886 NRP1O14786 923 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 KIAA0754O94854 1291 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 KRT15P19012 456 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 RABGGTBP53611 331 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 SLC10A2Q12908 348 aaPredicted RBP17.68■□□□□ 0.42
PTPRO-209ENST00000543886 LRRC14Q15048 493 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 TRIM71Q2Q1W2 868 aaKnown RBP17.68■□□□□ 0.42
PTPRO-209ENST00000543886 KLHL38Q2WGJ6 581 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 EFHC2Q5JST6 749 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 SYCP2LQ5T4T6 812 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 BZW1Q7L1Q6 419 aaKnown RBP17.68■□□□□ 0.42
PTPRO-209ENST00000543886 BNIPLQ7Z465 357 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 SLC7A14Q8TBB6 771 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 CCDC110Q8TBZ0 833 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 MYLPFQ96A32 169 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 WDR83Q9BRX9 315 aaKnown RBP17.68■□□□□ 0.42
PTPRO-209ENST00000543886 ETNK2Q9NVF9 386 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 FETUBQ9UGM5 382 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 RABGEF1Q9UJ41 708 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 GGA2Q9UJY4 613 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 CHMP2BQ9UQN3 213 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 ATXN2Q99700 1313 aaKnown RBP17.68■□□□□ 0.42
PTPRO-209ENST00000543886 VGLL3A8MV65 326 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 PAX3P23760 479 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 CACNA2D1P54289 1103 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 RASA2Q15283 850 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 RAB41Q5JT25 222 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 KCNT2Q6UVM3 1135 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 ARHGEF18Q6ZSZ5 1173 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 GPRIN1Q7Z2K8 1008 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 TRABD2AQ86V40 505 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 ECHDC2Q86YB7 292 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 CACNA2D3Q8IZS8 1091 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 ZMIZ2Q8NF64 920 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 HASPINQ8TF76 798 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 RNF139Q8WU17 664 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 LRRN4Q8WUT4 740 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 MRRFQ96E11 262 aaKnown RBP17.68■□□□□ 0.42
PTPRO-209ENST00000543886 ACBD6Q9BR61 282 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 NSRP1Q9H0G5 558 aaKnown RBP17.68■□□□□ 0.42
PTPRO-209ENST00000543886 SQORQ9Y6N5 450 aa17.68■□□□□ 0.42
PTPRO-209ENST00000543886 YJEFN3A6XGL0 299 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 E7ENQ6 273 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 VIMP08670 466 aaKnown RBP17.67■□□□□ 0.42
PTPRO-209ENST00000543886 USP17L7P0C7H9 530 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 ELK3P41970 407 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 BRCC3P46736 316 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 CORO7P57737 925 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 MAP3K21Q5TCX8 1036 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 FAXCQ5TGI0 409 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 HEATR6Q6AI08 1181 aaKnown RBP17.67■□□□□ 0.42
PTPRO-209ENST00000543886 VPS52Q8N1B4 723 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 FBF1Q8TES7 1133 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 TFB1MQ8WVM0 346 aaKnown RBP17.67■□□□□ 0.42
PTPRO-209ENST00000543886 GLT1D1Q96MS3 346 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 RTP3Q9BQQ7 232 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 ACSS3Q9H6R3 686 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 ARHGEF4Q9NR80 690 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 PIGVQ9NUD9 493 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms