RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 PRKCBP05771 671 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 ZRANB3Q5FWF4 1079 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 HS6ST3Q8IZP7 471 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 C8orf59Q8N0T1 100 aaPredicted RBP19.88■□□□□ 0.77
HDAC4-215ENST00000543185 CDC42EP4Q9H3Q1 356 aaKnown RBP19.88■□□□□ 0.77
HDAC4-215ENST00000543185 HOXB8P17481 243 aaPredicted RBP19.88■□□□□ 0.77
HDAC4-215ENST00000543185 CHRM3P20309 590 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 ACAD10Q6JQN1 1059 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 MYO1HQ8N1T3 1032 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 CPNE1Q99829 537 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 SLC25A23Q9BV35 468 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 NEDD8Q15843 81 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 MARK2Q7KZI7 788 aaKnown RBP19.88■□□□□ 0.77
HDAC4-215ENST00000543185 CHSY1Q86X52 802 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 ADPRHL2Q9NX46 363 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 CPB1P15086 417 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 GEMP55040 296 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 SLC45A4Q5BKX6 768 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 MYLPFQ96A32 169 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 TMA7Q9Y2S6 64 aaKnown RBP19.87■□□□□ 0.77
HDAC4-215ENST00000543185 SH3GLB1Q9Y371 365 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 ZNF467Q7Z7K2 595 aaPredicted RBP19.87■□□□□ 0.77
HDAC4-215ENST00000543185 C10orf53Q8N6V4 93 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 ZNF513Q8N8E2 541 aaPredicted RBP19.87■□□□□ 0.77
HDAC4-215ENST00000543185 GORASP1Q9BQQ3 440 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 PNPLA3Q9NST1 481 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 A0A1W2PRG6 482 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 BAIAP3O94812 1187 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 NR1D2Q14995 579 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 SLC25A24Q6NUK1 477 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 RAD9BQ6WBX8 426 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 KATNAL1Q9BW62 490 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 PCDH9Q9HC56 1237 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 SKIV2L2P42285 1042 aaKnown RBP19.87■□□□□ 0.77
HDAC4-215ENST00000543185 POLD3Q15054 466 aaPredicted RBP19.87■□□□□ 0.77
HDAC4-215ENST00000543185 ZSWIM7Q19AV6 140 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 RUNDC3AQ59EK9 446 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 EEPD1Q7L9B9 569 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 ACTRT2Q8TDY3 377 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 CLPBQ9H078 707 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 ASB14A6NK59 587 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 F9P00740 461 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 CNPP09543 421 aaKnown RBP19.87■□□□□ 0.77
HDAC4-215ENST00000543185 STRA8Q7Z7C7 330 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 PPP1R16BQ96T49 567 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 KDM6BO15054 1643 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 GSAPA4D1B5 854 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 SASH1O94885 1247 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 ATP6V1C1P21283 382 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 PCSK7Q16549 785 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 SMTNL2Q2TAL5 461 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 ERFEQ4G0M1 354 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 CLVS1Q8IUQ0 354 aaPredicted RBP19.87■□□□□ 0.77
HDAC4-215ENST00000543185 KCTD10Q9H3F6 313 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 VANGL2Q9ULK5 521 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 ACOT9Q9Y305 439 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 CLRN2A0PK11 232 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 FUT11Q495W5 492 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 STX12Q86Y82 276 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 TMEM237Q96Q45 408 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 EHD3Q9NZN3 535 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 E9PCH4 1651 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 ABCA6Q8N139 1617 aa19.87■□□□□ 0.77
HDAC4-215ENST00000543185 BCLAF3A2AJT9 711 aaKnown RBP19.86■□□□□ 0.77
HDAC4-215ENST00000543185 EURLQ9NYK6 297 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 OVOS2A0A0G2JMS6 1433 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 FLT1P17948 1338 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 OLR1P78380 273 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 NEK5Q6P3R8 708 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 ELOVL6Q9H5J4 265 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 MYH14Q7Z406 1995 aaKnown RBP19.86■□□□□ 0.77
HDAC4-215ENST00000543185 SKAP2O75563 359 aaPredicted RBP19.86■□□□□ 0.77
HDAC4-215ENST00000543185 GTF3C2Q8WUA4 911 aaPredicted RBP19.86■□□□□ 0.77
HDAC4-215ENST00000543185 CAPGP40121 348 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 RPL5P46777 297 aaKnown RBP19.86■□□□□ 0.77
HDAC4-215ENST00000543185 MYL6P60660 151 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 CAMK2GQ13555 558 aaPredicted RBP19.86■□□□□ 0.77
HDAC4-215ENST00000543185 OSBPL11Q9BXB4 747 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 URB1O60287 2271 aaKnown RBP19.86■□□□□ 0.77
HDAC4-215ENST00000543185 GRTP1Q5TC63 336 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 DHRSXQ8N5I4 330 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 S100GP29377 79 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 PREPLQ4J6C6 727 aaPredicted RBP19.86■□□□□ 0.77
HDAC4-215ENST00000543185 MACC1Q6ZN28 852 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 CCDC185Q8N715 623 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 UTP15Q8TED0 518 aaKnown RBP19.86■□□□□ 0.77
HDAC4-215ENST00000543185 FAM120BQ96EK7 910 aaKnown RBP19.86■□□□□ 0.77
HDAC4-215ENST00000543185 PRDM16Q9HAZ2 1276 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 IRAK3Q9Y616 596 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 DYNC1LI2O43237 492 aaPredicted RBP19.86■□□□□ 0.77
HDAC4-215ENST00000543185 SKP1P63208 163 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 ITGB3BPQ13352 177 aaPredicted RBP19.86■□□□□ 0.77
HDAC4-215ENST00000543185 SCARA3Q6AZY7 606 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 TMC3Q7Z5M5 1100 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.86■□□□□ 0.77
HDAC4-215ENST00000543185 NDUFAF1Q9Y375 327 aa19.86■□□□□ 0.77
HDAC4-215ENST00000543185 KIF28PB7ZC32 967 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 PDGFRBP09619 1106 aa19.85■□□□□ 0.77
HDAC4-215ENST00000543185 YWHAZP63104 245 aaKnown RBP19.85■□□□□ 0.77
HDAC4-215ENST00000543185 LRRC71Q8N4P6 559 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms